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Items: 3

1.

Bioinformatic evaluation and comparison of parallel aSNP and aCGH analyses of myelodysplastic syndromes patients with normal karyotype

(Submitter supplied) Parallel aSNP and aCGH analyses were performed on 22 samples from MDS patients with a normal karyotype. 55 overlapping alterations, most of these corresponding to CNVs were identified with both methods. Putative tumour specific imbalances were found with both methods in three cases, a deletion of TET2, a larger deletion containing DNMT3A and one complex molecular karyotype. In two cases putative tumour specific imbalances were only seen with aCGH: a 16p deletion in a low number of cells and a small homozygous deletion in WWOX. more...
Organism:
Homo sapiens
Type:
Genome variation profiling by genome tiling array
Platform:
GPL10123
27 Samples
Download data: TXT
Series
Accession:
GSE50897
ID:
200050897
2.

Agilent-022060 SurePrint G3 Human CGH Microarray 4x180K (Feature Number version)

(Submitter supplied) SurePrint G3 Human CGH Microarray 4x180K Arrays of this design have barcodes that begin with 16022060 or 2522060. Data table annotations based on build hg18:NCBI36:Mar2006. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. more...
Organism:
Homo sapiens
88 Series
1 Related Platform
1333 Samples
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Platform
Accession:
GPL10123
ID:
100010123
3.

CD3 lymphocytes from MD44

Organism:
Homo sapiens
Source name:
CD3 lymphocytes isolated from peripheral blood (channel 1) control DNA (channel 2)
Platform:
GPL10123
Series:
GSE50897
Download data: TXT
Sample
Accession:
GSM1232154
ID:
301232154
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