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Items: 3

1.

Long-range chromatin contacts reveal a role for the pluripotency and Polycomb networks in genome organization

(Submitter supplied) We mapped long-range chromatin interactions in embryonic stem cells (ESCs), iPSCs, and fibroblasts, and uncovered an ESC-specific genome organization that is gradually re-established during reprogramming. Confirming previous results, we show that open, accessible and closed chromatin character is the primary determinant of long-range chromatin interaction preferences. Importantly, we find that in ESCs, genomic regions extensively occupied by the pluripotency factors Oct4, Sox2, and Nanog preferentially co-localize. more...
Organism:
Mus musculus
Type:
Other
Platforms:
GPL13112 GPL11002
201 Samples
Download data: BEDGRAPH, XLSX
Series
Accession:
GSE50029
ID:
200050029
2.

Illumina HiSeq 2000 (Mus musculus)

Platform
Accession:
GPL13112
ID:
100013112
3.

ESC Vegfc replicate 2 read counts

Organism:
Mus musculus
Source name:
cell culture
Platform:
GPL13112
Series:
GSE50029
Download data: BEDGRAPH
Sample
Accession:
GSM1212854
ID:
301212854
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Supplemental Content

db=gds|term=GSM1212854[Accession]|query=1|qty=2|blobid=MCID_65dcb11ea642ff6770c82d96|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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