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Items: 3

1.

Array-based assay detects genome-wide 5-methylcytosine and 5-hydroxymethlycytosine in non-human primates and mice

(Submitter supplied) Murine and non-human primates (e.g. rhesus monkeys) represent excellent model systems to study human health and disease. However, use of these model systems for genomic studies is limited, particularly with array-based tools, as most have only been developed to survey the human genome. Here we present the optimization of a widely used human DNA methylation array, designed to detect 5-methylcytosine (5-mC), and show that non-human data generated using the optimized array reproducibly distinguishes tissue types within and between chimpanzee, rhesus, and mouse, with correlations near the human DNA level (R2 > 0.99). more...
Organism:
Pan troglodytes; Mus musculus; Macaca mulatta; Homo sapiens
Type:
Methylation profiling by genome tiling array
Platform:
GPL13534
61 Samples
Download data: TXT
Series
Accession:
GSE49177
ID:
200049177
2.

Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)

(Submitter supplied) 1 difference between HumanMethylation450_15017482_v.1.1.bpm and HumanMethylation450_15017482_v.1.2.bpm: 1.1: 41636384,NEGATIVE,-99,Negative 604 1.2: 41636384,RESTORATION,Green,Restore Protocol: See manufacturer's website
Organism:
Homo sapiens
1686 Series
1 Related Platform
119315 Samples
Download data: BPM, CSV, TXT, XLSX
Platform
Accession:
GPL13534
ID:
100013534
3.

E06_113_TAB_1

Organism:
Homo sapiens
Source name:
Homo sapiens, Brain
Platform:
GPL13534
Series:
GSE49177
Download data
Sample
Accession:
GSM1195076
ID:
301195076
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Supplemental Content

db=gds|term=GSM1195076[Accession]|query=1|qty=5|blobid=MCID_67516e9b8427d82e155b7423|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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