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Items: 3

1.

Identification and systematic annotation of tissue-specific differentially methylated regions using the Illumina 450k array

(Submitter supplied) Background DNA methylation has been recognized as a key mechanism in cell differentiation. Various studies have compared tissues to characterize epigenetically regulated genomic regions, but due to differences in study design and focus there still is no consensus as to the annotation of genomic regions predominantly involved in tissue-specific methylation. We used a new algorithm to identify and annotate tissue-specific Differentially Methylated Regions (tDMRs) in Illumina 450k chip data on four peripheral (blood, saliva, buccal swab and hair follicles) and six internal tissues (liver, muscle, pancreas, subcutaneous fat, omentum, spleen with matched blood samples). more...
Organism:
Homo sapiens
Type:
Methylation profiling by genome tiling array
Platform:
GPL13534
56 Samples
Download data: IDAT, TXT
Series
Accession:
GSE48472
ID:
200048472
2.

Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)

(Submitter supplied) 1 difference between HumanMethylation450_15017482_v.1.1.bpm and HumanMethylation450_15017482_v.1.2.bpm: 1.1: 41636384,NEGATIVE,-99,Negative 604 1.2: 41636384,RESTORATION,Green,Restore Protocol: See manufacturer's website
Organism:
Homo sapiens
1661 Series
1 Related Platform
117595 Samples
Download data: BPM, CSV, TXT, XLSX
Platform
Accession:
GPL13534
ID:
100013534
3.

Spleen_IT16

Organism:
Homo sapiens
Source name:
Autopsy
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179532
ID:
301179532
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db=gds|term=GSM1179532[Accession]|query=1|qty=2|blobid=MCID_65e2c3c70b2ad618bb85188e|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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