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Items: 3

1.

Comprehensive comparative analysis of RNA sequencing methods for degraded or low input samples

(Submitter supplied) RNA-Seq is an effective method to study the transcriptome, but can be difficult to apply to scarce or degraded RNA from fixed clinical samples, rare cell populations, or cadavers. Recent studies have proposed several methods for RNA-Seq of low quality and/or low quantity samples, but their relative merits have not been systematically analyzed. Here, we compare five such methods using a comprehensive set of metrics, relevant to applications such as transcriptome annotation, transcript discovery, and gene expression. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL11154 GPL16791
18 Samples
Download data: TXT
2.

Illumina HiSeq 2500 (Homo sapiens)

Platform
Accession:
GPL16791
ID:
100016791
3.

Pancreas_Total

Organism:
Homo sapiens
Source name:
human normal pancreas tissue (Zyagen)
Platform:
GPL16791
Series:
GSE40705
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Sample
Accession:
GSM1129245
ID:
301129245
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