GSM1047318[Accession] - GEO DataSets

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Items: 4

Select item 2000504881.

Chromatin organization in NPP-13 knockdown C. elegans embryos

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Caenorhabditis elegans

Type:: Genome binding/occupancy profiling by genome tiling array; Genome binding/occupancy profiling by high throughput sequencing

Platforms:: GPL8647 GPL13657
11 Samples

Download data: PAIR, WIG

Series

Accession:: GSE50488

ID:: 200050488

Select item 2000499022.

Chromatin organization in NPP-13 knockdown C. elegans embryos [array]

(Submitter supplied) C. elegans nuclear pore protein NPP-13 associates with small RNA genes transcribed by RNA Polymerase III. To test if the nuclear pore-chromatin interactions play a role in large-scale chromatin organization, we determined nuclear membrane-genome interactions and RNA Polymerase II localization in C. elegans embryos depleted for NPP-13.

Organism:: Caenorhabditis elegans

Type:: Genome binding/occupancy profiling by genome tiling array

Platform:: GPL8647
5 Samples

Download data: PAIR, WIG

Series

Accession:: GSE49902

ID:: 200049902

Select item 1000086473.

080922_modEncode_Caenorhabditis elegans_2M tiling chip_HX1

(Submitter supplied) Native NimbleGen files (ndf, pos) are linked below as supplementary files. Protocol: Singh-Gasson S, Green RD, Yue Y, Nelson C, Blattner F, Sussman MR,Cerrina F. Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array. Nat Biotechnol. 1999 Oct;17(10):974-8. PMID: 10504697