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Items: 4

1.

The RUNX2 Cistrome in Osteoblasts: Characterization, Downregulation Following Differentiation and Relationship to Gene Expression

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL13179 GPL13112
22 Samples
Download data: BED, BEDGRAPH, CALLS, PAIR
Series
Accession:
GSE41955
ID:
200041955
2.

The RUNX2 Cistrome in Osteoblasts: Characterization, Downregulation Following Differentiation and Relationship to Gene Expression [ChIP-Seq]

(Submitter supplied) RUNX2 is a transcription factor that is first expressed in early osteoblast-lineage cells and represents a primary determinant of osteoblastogenesis. While numerous target genes are regulated by RUNX2, little is known of sites on the genome occupied by RUNX2 or of the gene networks that are controlled by these sites. To explore this, we conducted a genome-wide analysis of the RUNX2 cistrome in both pre-osteoblastic MC3T3-E1 cells (POB) and their mature osteoblast progeny (OB), characterized the two cistromes and assessed their relationship to changes in gene expression. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL13112
16 Samples
Download data: BED, BEDGRAPH
Series
Accession:
GSE41920
ID:
200041920
3.

Illumina HiSeq 2000 (Mus musculus)

Platform
Accession:
GPL13112
ID:
100013112
4.

OB_H3K9AcVeh

Organism:
Mus musculus
Source name:
MC3T3-E1 cells differentiated for 15 days
Platform:
GPL13112
Series:
GSE41920 GSE41955
Download data: BED, BEDGRAPH
Sample
Accession:
GSM1027500
ID:
301027500
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Supplemental Content

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