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1.

High fat diet-induced changes of mouse hepatic transcription and enhancer activity can be reversed by subsequent weight loss

(Submitter supplied) In this setup we have used RNA-seq, DHS-seq, and H3K27ac ChIP-seq to identify changes in transcription, chromatin landscape and enhancer activity in livers of mice fed a high fat diet (HFD) and mice returned from HFD to Chow.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL18480
28 Samples
Download data: BEDGRAPH
Series
Accession:
GSE87565
ID:
200087565
2.

Illumina HiSeq 1500 (Mus musculus)

Platform
Accession:
GPL18480
ID:
100018480
3.

HFD-chow, rep3 (ChIP-Seq)

Organism:
Mus musculus
Source name:
HFD-chow, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333860
ID:
302333860
4.

HFD-chow, rep2 (ChIP-Seq)

Organism:
Mus musculus
Source name:
HFD-chow, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333859
ID:
302333859
5.

HFD-chow, rep1 (ChIP-Seq)

Organism:
Mus musculus
Source name:
HFD-chow, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333858
ID:
302333858
6.

Chow-chow, rep3 (ChIP-Seq)

Organism:
Mus musculus
Source name:
Chow-chow, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333857
ID:
302333857
7.

Chow-chow, rep2 (ChIP-Seq)

Organism:
Mus musculus
Source name:
Chow-chow, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333856
ID:
302333856
8.

Chow-chow, rep1 (ChIP-Seq)

Organism:
Mus musculus
Source name:
Chow-chow, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333855
ID:
302333855
9.

HFD, rep3 (ChIP-Seq)

Organism:
Mus musculus
Source name:
HFD, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333854
ID:
302333854
10.

HFD, rep2 (ChIP-Seq)

Organism:
Mus musculus
Source name:
HFD, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333853
ID:
302333853
11.

HFD, rep1 (ChIP-Seq)

Organism:
Mus musculus
Source name:
HFD, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333852
ID:
302333852
12.

Chow, rep3 (ChIP-Seq)

Organism:
Mus musculus
Source name:
Chow, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333851
ID:
302333851
13.

Chow, rep2 (ChIP-Seq)

Organism:
Mus musculus
Source name:
Chow, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333850
ID:
302333850
14.

Chow, rep1 (ChIP-Seq)

Organism:
Mus musculus
Source name:
Chow, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333849
ID:
302333849
15.

HFD 40U, rep2 (DHS-Seq)

Organism:
Mus musculus
Source name:
HFD 40U, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333848
ID:
302333848
16.

HFD 40U, rep1 (DHS-Seq)

Organism:
Mus musculus
Source name:
HFD 40U, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333847
ID:
302333847
17.

Chow 40U, rep2 (DHS-Seq)

Organism:
Mus musculus
Source name:
Chow 40U, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333846
ID:
302333846
18.

Chow 40U, rep1 (DHS-Seq)

Organism:
Mus musculus
Source name:
Chow 40U, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333845
ID:
302333845
19.

HFD-chow, rep3 (RNA-Seq)

Organism:
Mus musculus
Source name:
HFD-chow, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333844
ID:
302333844
20.

HFD-chow, rep2 (RNA-Seq)

Organism:
Mus musculus
Source name:
HFD-chow, liver
Platform:
GPL18480
Series:
GSE87565
Download data: BEDGRAPH
Sample
Accession:
GSM2333843
ID:
302333843
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Supplemental Content

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