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Items: 1 to 20 of 51

1.

Dynamic Reorganization of Chromatin Accessibility Signatures during Dedifferentiation of Secretory Precursors into Lgr5+ Intestinal Stem Cells

(Submitter supplied) To define differences in chormatin accessibility and histome modifications in intestinal stem and epithelial cells, we performed ATAC-seq and ChIP-seq. We used RNA-sequencing to profile gene expression changes during intestinal stem cell differentiation into different cell types. We find that gene expression is correlated with the chromatin accessibility and reveals differences between intestinal stem cells types.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other
Platform:
GPL19057
49 Samples
Download data: BW, TXT
Series
Accession:
GSE83394
ID:
200083394
2.

Illumina NextSeq 500 (Mus musculus)

Platform
Accession:
GPL19057
ID:
100019057
3.

Goblet Cells RNA-seq biological rep2

Organism:
Mus musculus
Source name:
mouse Goblet cells
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2491757
ID:
302491757
4.

Goblet Cells RNA-seq biological rep1

Organism:
Mus musculus
Source name:
mouse Goblet cells
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2491756
ID:
302491756
5.

CD274+69+ DT-Treated RNA-seq biological rep2

Organism:
Mus musculus
Source name:
CD 274,69 labeled mouse intestinal cells after DT treatment
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2491755
ID:
302491755
6.

CD274+69+ DT-Treated RNA-seq biological rep1

Organism:
Mus musculus
Source name:
CD 274,69 labeled mouse intestinal cells after DT treatment
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2491754
ID:
302491754
7.

Control CD274+69+ RNA-seq biological rep2

Organism:
Mus musculus
Source name:
CD 274,69 labeled mouse intestinal cells
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2491753
ID:
302491753
8.

Control CD274+69+ RNA-seq biological rep1

Organism:
Mus musculus
Source name:
CD 274,69 labeled mouse intestinal cells
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2491752
ID:
302491752
9.

Enterocyte Progenitor H3K4me1 ChIP-seq biological rep2

Organism:
Mus musculus
Source name:
mouse enterocyte progenitor cells
Platform:
GPL19057
Series:
GSE83394
Download data: BW
Sample
Accession:
GSM2491751
ID:
302491751
10.

Bmi1-GFP-Irradiated RNA-seq 36hr biological rep1

Organism:
Mus musculus
Source name:
Bmi1-GFP+ mouse intestinal cells after irradiation
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2201150
ID:
302201150
11.

Paneth Cells RNA-seq biological rep2

Organism:
Mus musculus
Source name:
mouse Paneth cells
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2201148
ID:
302201148
12.

Paneth Cells RNA-seq biological rep1

Organism:
Mus musculus
Source name:
mouse Paneth cells
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2201146
ID:
302201146
13.

Enteroendocrine Cells RNA-seq biological rep2

Organism:
Mus musculus
Source name:
mouse Enteroendocrine cells
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2201144
ID:
302201144
14.

Enteroendocrine Cells RNA-seq biological rep1

Organism:
Mus musculus
Source name:
mouse Enteroendocrine cells
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2201143
ID:
302201143
15.

Secretory Progenitors Rbpj RNA-seq biological rep2

Organism:
Mus musculus
Source name:
mouse secretory progenitor cells
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2201142
ID:
302201142
16.

Secretory Progenitors Rbpj RNA-seq biological rep1

Organism:
Mus musculus
Source name:
mouse secretory progenitor cells
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2201141
ID:
302201141
17.

Secretory Progenitors DBZ RNA-seq biological rep2

Organism:
Mus musculus
Source name:
mouse secretory progenitor cells
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2201140
ID:
302201140
18.

Secretory Progenitors DBZ RNA-seq biological rep1

Organism:
Mus musculus
Source name:
mouse secretory progenitor cells
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2201139
ID:
302201139
19.

Enterocyte Progenitor RNA-seq biological rep2

Organism:
Mus musculus
Source name:
mouse enterocyte progenitor cells
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2201138
ID:
302201138
20.

Enterocyte Prgenitors RNA-seq biological rep1

Organism:
Mus musculus
Source name:
mouse enterocyte progenitor cells
Platform:
GPL19057
Series:
GSE83394
Download data
Sample
Accession:
GSM2201137
ID:
302201137
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Supplemental Content

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