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Items: 1 to 20 of 53

1.

Association with Aurora-A controls N-MYC-dependent promoter escape and pause release of RNA polymerase II during the cell cycle

(Submitter supplied) MYC proteins bind globally to active promoters and promote transcriptional elongation by RNA polymerase II (RNAPII). To identify effector proteins that mediate this function, we performed mass spectrometry on N-MYC complexes in neuroblastoma cells. The analysis shows that N-MYC forms complexes with TFIIIC, TOP2A and RAD21, a subunit of cohesin. N-MYC and TFIIIC bind to overlapping sites in thousands of RNAPII promoters and intergenic regions. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL18573 GPL10999
50 Samples
Download data: BEDGRAPH, TXT, WIG
2.

Illumina NextSeq 500 (Homo sapiens)

Platform
Accession:
GPL18573
ID:
100018573
3.

Illumina Genome Analyzer IIx (Homo sapiens)

Platform
Accession:
GPL10999
ID:
100010999
4.

SHEP_NMYCER_input8WG16_plusOHT

Organism:
Homo sapiens
Source name:
SH-EP-NMYCER
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM3036233
ID:
303036233
5.

SHEP_NMYCER_8WG16_plusOHT

Organism:
Homo sapiens
Source name:
SH-EP-NMYCER
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM3036232
ID:
303036232
6.

SHEP_NMYCER_8WG16_minusOHT

Organism:
Homo sapiens
Source name:
SH-EP-NMYCER
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM3036231
ID:
303036231
7.

RAD21

Organism:
Homo sapiens
Source name:
IMR-5
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM2759387
ID:
302759387
8.

CTCF

Organism:
Homo sapiens
Source name:
IMR-5
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM2759386
ID:
302759386
9.

input_CTCF_RAD21

Organism:
Homo sapiens
Source name:
IMR-5
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM2759385
ID:
302759385
10.

SHEP_NMYCER_TF3C5depletion_RNAPII_N20_plusOHT_DOX

Organism:
Homo sapiens
Source name:
SH-EP-NMYCER
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM2589155
ID:
302589155
11.

SHEP_NMYCER_TF3C5depletion_RNAPII_N20_minusOHT_DOX

Organism:
Homo sapiens
Source name:
SH-EP-NMYCER
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM2589154
ID:
302589154
12.

SHEP_NMYCER_TF3C5depletion_RNAPII_N20_plusOHT_EtOH

Organism:
Homo sapiens
Source name:
SH-EP-NMYCER
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM2589153
ID:
302589153
13.

SHEP_NMYCER_TF3C5depletion_RNAPII_N20_minusOHT_EtOH

Organism:
Homo sapiens
Source name:
SH-EP-NMYCER
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM2589152
ID:
302589152
14.

SHEP_NMYCER_TF3C5depletion_input

Organism:
Homo sapiens
Source name:
SH-EP-NMYCER
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM2589151
ID:
302589151
15.

SHEP_NMYCER_Sphase_arrested_RNAPII_N20_plusOHT_CD532

Organism:
Homo sapiens
Source name:
SH-EP-NMYCER
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM2589150
ID:
302589150
16.

SHEP_NMYCER_Sphase_arrested_RNAPII_N20_minusOHT_CD532

Organism:
Homo sapiens
Source name:
SH-EP-NMYCER
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM2589149
ID:
302589149
17.

SHEP_NMYCER_Sphase_arrested_RNAPII_N20_plusOHT_DMSO

Organism:
Homo sapiens
Source name:
SH-EP-NMYCER
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM2589148
ID:
302589148
18.

SHEP_NMYCER_Sphase_arrested_RNAPII_N20_minusOHT_DMSO

Organism:
Homo sapiens
Source name:
SH-EP-NMYCER
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM2589147
ID:
302589147
19.

SHEP_NMYCER_Sphase_arrested_input

Organism:
Homo sapiens
Source name:
SH-EP-NMYCER
Platform:
GPL18573
Series:
GSE78957
Download data: BEDGRAPH
Sample
Accession:
GSM2589146
ID:
302589146
20.

SHEP_NMYCER_plusOHT_rep3

Organism:
Homo sapiens
Source name:
SH-EP-NMYCER
Platform:
GPL18573
Series:
GSE78957
Download data
Sample
Accession:
GSM2589145
ID:
302589145
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Supplemental Content

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