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Items: 1 to 20 of 36

1.

Single-base resolution methylome of 5-methylcytosine in mammalian transcriptome

(Submitter supplied) mRNAs of human and mouse cell lines were purified using oligo (dT)-conjugated magnetic beads followed by RiboMinus treatement. mRNAs were fragmented to ~100 nt and treated by Sodium bisulfite solution (pH 5.1) containing Hydroquinone. Bisulfite treated mRNAs were reverse transcribed to cDNA using ACT random hexamer primers. The cDNAs were subjected to libraries construction using KAPA Stranded mRNA-Seq Kit (KAPA) and performed sequencing on HiSeq2000/3000 (Illumina) in pair-end mode, creating reads with a length of 101 bp. more...
Organism:
Homo sapiens; Mus musculus
Type:
Other
4 related Platforms
31 Samples
Download data: TXT
Series
Accession:
GSE74771
ID:
200074771
2.

Illumina HiSeq 3000 (Mus musculus)

Platform
Accession:
GPL21493
ID:
100021493
3.

Illumina HiSeq 3000 (Homo sapiens)

Platform
Accession:
GPL21290
ID:
100021290
4.

Illumina HiSeq 2000 (Mus musculus)

Platform
Accession:
GPL13112
ID:
100013112
5.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
6.

SNB19_BS

Organism:
Homo sapiens
Source name:
normal human SNB19 cells - bisulfite-treated mRNAs
Platform:
GPL11154
Series:
GSE74771
Download data: TXT
Sample
Accession:
GSM2174920
ID:
302174920
7.

MRC-5_BS

Organism:
Homo sapiens
Source name:
normal human MRC-5 cells - bisulfite-treated mRNAs
Platform:
GPL11154
Series:
GSE74771
Download data: TXT
Sample
Accession:
GSM2174919
ID:
302174919
8.

Huh7_BS

Organism:
Homo sapiens
Source name:
normal human Huh7 cells - bisulfite-treated mRNAs
Platform:
GPL11154
Series:
GSE74771
Download data: TXT
Sample
Accession:
GSM2174918
ID:
302174918
9.

HCT116_BS

Organism:
Homo sapiens
Source name:
normal human HCT116 cells - bisulfite-treated mRNAs
Platform:
GPL11154
Series:
GSE74771
Download data: TXT
Sample
Accession:
GSM2174917
ID:
302174917
10.

293T_BS

Organism:
Homo sapiens
Source name:
normal human 293T cells - bisulfite-treated mRNAs
Platform:
GPL11154
Series:
GSE74771
Download data: TXT
Sample
Accession:
GSM2174916
ID:
302174916
11.

siNSUN2_HeLa_rep2BS

Organism:
Homo sapiens
Source name:
Human HeLa cells
Platform:
GPL11154
Series:
GSE74771
Download data: TXT
Sample
Accession:
GSM1932921
ID:
301932921
12.

siNSUN2_HeLa_rep1BS

Organism:
Homo sapiens
Source name:
Human HeLa cells
Platform:
GPL11154
Series:
GSE74771
Download data: TXT
Sample
Accession:
GSM1932920
ID:
301932920
13.

siCTRL_HeLa_rep2BS

Organism:
Homo sapiens
Source name:
Human HeLa cells
Platform:
GPL11154
Series:
GSE74771
Download data: TXT
Sample
Accession:
GSM1932919
ID:
301932919
14.

siCTRL_HeLa_rep1BS

Organism:
Homo sapiens
Source name:
Human HeLa cells
Platform:
GPL11154
Series:
GSE74771
Download data: TXT
Sample
Accession:
GSM1932918
ID:
301932918
15.

M-1_BS

Organism:
Mus musculus
Source name:
normal mouse M-1 cells - bisulfite-treated mRNAs
Platform:
GPL21493
Series:
GSE74771
Download data: TXT
Sample
Accession:
GSM2174921
ID:
302174921
16.

U14_BS

Organism:
Mus musculus
Source name:
normal mouse U14 cells - bisulfite-treated mRNAs
Platform:
GPL13112
Series:
GSE74771
Download data: TXT
Sample
Accession:
GSM2174922
ID:
302174922
17.

Spleen_8w_BS

Organism:
Mus musculus
Source name:
8-week-old Mouse spleen
Platform:
GPL13112
Series:
GSE74771
Download data: TXT
Sample
Accession:
GSM1932939
ID:
301932939
18.

Thymus_8w_BS

Organism:
Mus musculus
Source name:
8-week-old Mouse thymus
Platform:
GPL13112
Series:
GSE74771
Download data: TXT
Sample
Accession:
GSM1932938
ID:
301932938
19.

Large-intestine_8w_BS

Organism:
Mus musculus
Source name:
8-week-old Mouse large intestine
Platform:
GPL13112
Series:
GSE74771
Download data: TXT
Sample
Accession:
GSM1932937
ID:
301932937
20.

Small-intestine_8w_BS

Organism:
Mus musculus
Source name:
8-week-old Mouse small intestine
Platform:
GPL13112
Series:
GSE74771
Download data: TXT
Sample
Accession:
GSM1932936
ID:
301932936
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Supplemental Content

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