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Items: 1 to 20 of 111

1.

Fixed tissue ChIP-Seq (FiT-Seq) of archived clinical samples reveals chromatin dynamics and tumor-specific enhancer profiles

(Submitter supplied) Analysis of cancer epigenomes has revealed important insights into key lineage determinants and oncogenic drivers. Chromatin immune-precipitation followed by next generation sequencing (ChIP-seq) has allowed the comprehensive mapping of transcription factor cistromes and histone modifications in fresh or frozen cells and tissues. It has not been possible, however, to apply ChIP-seq to the vast majority of clinical tissue samples, owing to the very extensive tissue fixation and cross-linking introduced during routine pathological processing. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL18573
109 Samples
Download data: BW, FPKM_TRACKING
Series
Accession:
GSE73398
ID:
200073398
2.

Illumina NextSeq 500 (Homo sapiens)

Platform
Accession:
GPL18573
ID:
100018573
3.

Xeno_FFPE_Input_1

Organism:
Homo sapiens
Source name:
MCF7-xenograft
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892705
ID:
301892705
4.

Xeno_FF_1_Input_1

Organism:
Homo sapiens
Source name:
MCF7-xenograft
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892704
ID:
301892704
5.

SM_3_FFPE_Input

Organism:
Homo sapiens
Source name:
Seminoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892703
ID:
301892703
6.

SM_2_FFPE_Input

Organism:
Homo sapiens
Source name:
Seminoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892702
ID:
301892702
7.

SM_1_FFPE_Input

Organism:
Homo sapiens
Source name:
Seminoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892701
ID:
301892701
8.

CRC_9_FF_Input

Organism:
Homo sapiens
Source name:
Primary colorectal carcinoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892700
ID:
301892700
9.

CRC_8_FFPE_Input

Organism:
Homo sapiens
Source name:
Primary colorectal carcinoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892699
ID:
301892699
10.

CRC_7_FFPE_Input

Organism:
Homo sapiens
Source name:
Primary colorectal carcinoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892698
ID:
301892698
11.

CRC_6_FFPE_Input

Organism:
Homo sapiens
Source name:
Primary colorectal carcinoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892697
ID:
301892697
12.

CRC_6_FF_Input

Organism:
Homo sapiens
Source name:
Primary colorectal carcinoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892696
ID:
301892696
13.

CRC_5_FFPE_Input

Organism:
Homo sapiens
Source name:
Primary colorectal carcinoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892695
ID:
301892695
14.

CRC_5_FF_Input

Organism:
Homo sapiens
Source name:
Primary colorectal carcinoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892694
ID:
301892694
15.

CRC_4_FFPE_Input

Organism:
Homo sapiens
Source name:
Primary colorectal carcinoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892693
ID:
301892693
16.

CRC_4_FF_Input

Organism:
Homo sapiens
Source name:
Primary colorectal carcinoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892692
ID:
301892692
17.

CRC_3_FFPE_Input

Organism:
Homo sapiens
Source name:
Primary colorectal carcinoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892691
ID:
301892691
18.

CRC_3_FF_Input

Organism:
Homo sapiens
Source name:
Primary colorectal carcinoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892690
ID:
301892690
19.

CRC_2_FFPE_Input

Organism:
Homo sapiens
Source name:
Primary colorectal carcinoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892689
ID:
301892689
20.

CRC_2_FF_Input

Organism:
Homo sapiens
Source name:
Primary colorectal carcinoma
Platform:
GPL18573
Series:
GSE73398
Download data
Sample
Accession:
GSM1892688
ID:
301892688
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Supplemental Content

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