GSE71549[Accession] - GEO DataSets

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Select item 2000715491.

Aflatoxin B1 induces persistent epigenomic effects in primary human hepatocytes associated with hepatocellular carcinoma

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Expression profiling by array; Non-coding RNA profiling by array; Methylation profiling by genome tiling array

Platforms:: GPL17996 GPL18402 GPL16284
18 Samples

Download data: CEL, PAIR, TXT

Series

Accession:: GSE71549

ID:: 200071549

Select item 1000179962.

[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (custom CDF: HGU133Plus2_Hs_ENTREZG.cdf version 15.1.0)

(Submitter supplied) This array is identical to GPL570 but the data were analyzed with a custom CDF environment. Protocol: Refer to Affymetrix manufacture protocol for HG-U133 Plus 2.0 array

Organism:: Homo sapiens

10 Series
1 Related Platform
91 Samples

Download data: CDF, TXT

Platform

Accession:: GPL17996

ID:: 100017996

Select item 1000184023.

Agilent-046064 Unrestricted_Human_miRNA_V19.0_Microarray (miRNA ID version)

(Submitter supplied) See manufacturer's web site at http://www.agilent.com/

Organism:: Homo sapiens

97 Series
1 Related Platform
2891 Samples

Download data

Platform

Accession:: GPL18402

ID:: 100018402

Select item 1000162844.

NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]

(Submitter supplied) Build: HG19, NCBI 37 Protocol: see manufacturer's website

Organism:: Homo sapiens

16 Series
175 Samples

Download data: GFF, NCD, NDF, POS

Platform

Accession:: GPL16284

ID:: 100016284

Select item 3018367915.

PHH_WO_LD_exp3 [mRNA]

Organism:: Homo sapiens

Source name:: PHH_WO_LD_exp3

Platform:: GPL17996
Series:: GSE71547 GSE71549

Download data: CEL

Sample

Accession:: GSM1836791

ID:: 301836791

Select item 3018367906.

PHH_WO_LD_exp2 [mRNA]

Organism:: Homo sapiens

Source name:: PHH_WO_LD_exp2

Platform:: GPL17996
Series:: GSE71547 GSE71549

Download data: CEL

Sample

Accession:: GSM1836790

ID:: 301836790

Select item 3018367897.

PHH_WO_LD_exp1 [mRNA]

Organism:: Homo sapiens

Source name:: PHH_WO_LD_exp1

Platform:: GPL17996
Series:: GSE71547 GSE71549

Download data: CEL

Sample

Accession:: GSM1836789

ID:: 301836789

Select item 3018367888.

PHH_WO_LD_control_exp3 [mRNA]

Organism:: Homo sapiens

Source name:: PHH_WO_LD_control_exp3

Platform:: GPL17996
Series:: GSE71547 GSE71549

Download data: CEL

Sample

Accession:: GSM1836788

ID:: 301836788

Select item 3018367879.

PHH_WO_LD_control_exp2 [mRNA]

Organism:: Homo sapiens

Source name:: PHH_WO_LD_control_exp2

Platform:: GPL17996
Series:: GSE71547 GSE71549

Download data: CEL

Sample

Accession:: GSM1836787

ID:: 301836787

Select item 30183678610.

PHH_WO_LD_control_exp1 [mRNA]

Organism:: Homo sapiens

Source name:: PHH_WO_LD_control_exp1

Platform:: GPL17996
Series:: GSE71547 GSE71549

Download data: CEL

Sample

Accession:: GSM1836786

ID:: 301836786

Select item 30183679711.

PHH_WO_LD_exp3 [genomic]

Organism:: Homo sapiens

Source name:: Input DNA from PHH exposed to 0.3uM of AFB1 for 5 days followed by a 3-day washout period replicate 3 (channel 1) DNA from PHH exposed to 0.3uM of AFB1 for 5 days followed by a 3-day washout period replicate 3 (channel 2)

Platform:: GPL16284
Series:: GSE71548 GSE71549

Download data: PAIR

Sample

Accession:: GSM1836797

ID:: 301836797

Select item 30183679612.

PHH_WO_LD_exp2 [genomic]

Organism:: Homo sapiens

Source name:: Input DNA from PHH exposed to 0.3uM of AFB1 for 5 days followed by a 3-day washout period replicate 2 (channel 1) DNA from PHH exposed to 0.3uM of AFB1 for 5 days followed by a 3-day washout period replicate 2 (channel 2)

Platform:: GPL16284
Series:: GSE71548 GSE71549

Download data: PAIR

Sample

Accession:: GSM1836796

ID:: 301836796

Select item 30183679513.

PHH_WO_LD_exp1 [genomic]

Organism:: Homo sapiens

Source name:: Input DNA from PHH exposed to 0.3uM of AFB1 for 5 days followed by a 3-day washout period replicate 3 (channel 1) DNA from PHH exposed to 0.3uM of AFB1 for 5 days followed by a 3-day washout period replicate 3 (channel 2)

Platform:: GPL16284
Series:: GSE71548 GSE71549

Download data: PAIR

Sample

Accession:: GSM1836795

ID:: 301836795

Select item 30183679414.

PHH_WO_control_exp3 [genomic]

Organism:: Homo sapiens

Source name:: Input DNA from PHH exposed to zero dose of AFB1 for 5 days followed by a 3-day washout period replicate 3 (channel 1) DNA from PHH exposed to zero dose of AFB1 for 5 days followed by a 3-day washout period replicate 3 (channel 2)

Platform:: GPL16284
Series:: GSE71548 GSE71549

Download data: PAIR

Sample

Accession:: GSM1836794

ID:: 301836794

Select item 30183679315.

PHH_WO_control_exp2 [genomic]

Organism:: Homo sapiens

Source name:: Input DNA from PHH exposed to zero dose of AFB1 for 5 days followed by a 3-day washout period replicate 2 (channel 1) DNA from PHH exposed to zero dose of AFB1 for 5 days followed by a 3-day washout period replicate 2 (channel 2)

Platform:: GPL16284
Series:: GSE71548 GSE71549

Download data: PAIR

Sample

Accession:: GSM1836793

ID:: 301836793

Select item 30183679216.

PHH_WO_control_exp1 [genomic]

Organism:: Homo sapiens

Source name:: Input DNA from PHH exposed to zero dose of AFB1 for 5 days followed by a 3-day washout period replicate 1 (channel 1) DNA from PHH exposed to zero dose of AFB1 for 5 days followed by a 3-day washout period replicate 1 (channel 2)