GSE67005[Accession] - GEO DataSets

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Items: 11

Select item 2000670051.

Aflatoxin B1 exposure induces epigenetic mechanisms in primary human hepatocytes revealing novel biological processes associated with hepatocellular carcinoma (MeDIP)

(Submitter supplied) The study investigated differential gene expression, microRNA expression and DNA methylation changes in a pool of primary human hepatocyte RNA and DNA following 5 days of repetitive exposure to a low or moderate dose of aflatoxin B1 or DMSO. Three biological replicates per compound/solvent. In total 9 arrays.

Organism:: Homo sapiens

Type:: Genome binding/occupancy profiling by genome tiling array

Platform:: GPL16284
9 Samples

Download data: PAIR, TXT

Series

Accession:: GSE67005

ID:: 200067005

PubMed Similar studies

Select item 1000162842.

NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100929_HG19_Deluxe_Prom_Meth_HX1]

(Submitter supplied) Build: HG19, NCBI 37 Protocol: see manufacturer's website

Organism:: Homo sapiens

16 Series
175 Samples

Download data: GFF, NCD, NDF, POS

Platform

Accession:: GPL16284

ID:: 100016284

Select item 3016358943.

PHH_5D_LD_exp3

Organism:: Homo sapiens

Source name:: Input DNA from PHH exposed to 0.3 uM dose dose of AFB1 for 5 days (channel 1) Immunoprecipitated DNA from PHH exposed to 0.3 uM dose dose of AFB1 for 5 days (channel 2)

Platform:: GPL16284
Series:: GSE67005 GSE67078

Download data: PAIR

Sample

Accession:: GSM1635894

ID:: 301635894

Select item 3016358934.

PHH_5D_LD_exp2

Organism:: Homo sapiens

Source name:: Input DNA from PHH exposed to 0.3 uM dose dose of AFB1 for 5 days (channel 1) Immunoprecipitated DNA from PHH exposed to 0.3 uM dose dose of AFB1 for 5 days (channel 2)

Platform:: GPL16284
Series:: GSE67005 GSE67078

Download data: PAIR

Sample

Accession:: GSM1635893

ID:: 301635893

Select item 3016358925.

PHH_5D_LD_exp1

Organism:: Homo sapiens

Source name:: Input DNA from PHH exposed to 0.3 uM dose dose of AFB1 for 5 days (channel 1) Immunoprecipitated DNA from PHH exposed to 0.3 uM dose dose of AFB1 for 5 days (channel 2)

Platform:: GPL16284
Series:: GSE67005 GSE67078

Download data: PAIR

Sample

Accession:: GSM1635892

ID:: 301635892

Select item 3016358916.

PHH_5D_HD_exp3

Organism:: Homo sapiens

Source name:: Input DNA from PHH exposed to 1 uM dose dose of AFB1 for 5 days (channel 1) Immunoprecipitated DNA PHH exposed to 1 uM dose dose of AFB1 for 5 days (channel 2)

Platform:: GPL16284
Series:: GSE67005 GSE67078

Download data: PAIR

Sample

Accession:: GSM1635891

ID:: 301635891

Select item 3016358907.

PHH_5D_HD_exp2

Organism:: Homo sapiens

Source name:: Input DNA from PHH exposed to 1 uM dose dose of AFB1 for 5 days (channel 1) Immunoprecipitated DNA PHH exposed to 1 uM dose dose of AFB1 for 5 days (channel 2)

Platform:: GPL16284
Series:: GSE67005 GSE67078

Download data: PAIR

Sample

Accession:: GSM1635890

ID:: 301635890

Select item 3016358898.

PHH_5D_HD_exp1

Organism:: Homo sapiens

Source name:: Input DNA from PHH exposed to 1 uM dose dose of AFB1 for 5 days (channel 1) Immunoprecipitated DNA PHH exposed to 1 uM dose dose of AFB1 for 5 days (channel 2)

Platform:: GPL16284
Series:: GSE67005 GSE67078

Download data: PAIR

Sample

Accession:: GSM1635889

ID:: 301635889

Select item 3016358889.

PHH_5D_control_exp3

Organism:: Homo sapiens

Source name:: Input DNA from PHH exposed to zero dose of AFB1 for 5 days (channel 1) Immunoprecipitated from PHH exposed to zero dose of AFB1 for 5 days (channel 2)

Platform:: GPL16284
Series:: GSE67005 GSE67078

Download data: PAIR

Sample

Accession:: GSM1635888

ID:: 301635888

Select item 30163588710.

PHH_5D_control_exp2

Organism:: Homo sapiens

Source name:: Input DNA from PHH exposed to zero dose of AFB1 for 5 days (channel 1) Immunoprecipitated DNA from PHH exposed to zero dose of AFB1 for 5 days (channel 2)

Platform:: GPL16284
Series:: GSE67005 GSE67078

Download data: PAIR

Sample

Accession:: GSM1635887

ID:: 301635887

Select item 30163588611.

PHH_5D_control_exp1

Organism:: Homo sapiens

Source name:: Input DNA from PHH exposed to zero dose of AFB1 for 5 days (channel 1) Immunoprecipitated DNA from PHH exposed to zero dose of AFB1 for 5 days (channel 2)