U.S. flag

An official website of the United States government

Format
Items per page
Sort by

Send to:

Choose Destination

Search results

Items: 1 to 20 of 32

1.

En bloc and segmental deletions of human XIST reveal X chromosome inactivation-involving RNA elements

(Submitter supplied) RNA-seqs followed by whole and segmental deletions of XIST genes in human K562 cells. The XIST RNA is a non-coding RNA that induces X chromosome inactivation (XCI). Unlike the mouse Xist RNA, how the human XIST RNA controls XCI in female cells is less well characterized, and the XCI-involving RNA elements remain unclear. To systematically decipher the XCI-involving elements of XIST RNA, ten smaller XIST segments, including repeats A, D, and E; human-specific repeat elements; the promoter; and non-repetitive exons, as well as the entire XIST gene, were homozygously deleted using the Cas9 nuclease and paired guide RNAs at high efficiencies, followed by high-throughput RNA sequencing and fluorescence in-situ hybridization experiments on XIST RNA.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Other
Platforms:
GPL16791 GPL11154
29 Samples
Download data: TXT, VCF
2.

Illumina HiSeq 2500 (Homo sapiens)

Platform
Accession:
GPL16791
ID:
100016791
3.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
4.

SD11-7

Organism:
Homo sapiens
Source name:
K563 cells
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3564382
ID:
303564382
5.

SD5-5

Organism:
Homo sapiens
Source name:
K562 cells
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3564381
ID:
303564381
6.

SD2-2

Organism:
Homo sapiens
Source name:
K562 cells
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3564380
ID:
303564380
7.

SD8-6

Organism:
Homo sapiens
Source name:
K562 cells
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3544627
ID:
303544627
8.

SD7-27

Organism:
Homo sapiens
Source name:
K563 cells
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3544626
ID:
303544626
9.

SD7-10

Organism:
Homo sapiens
Source name:
K562 cells
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3544625
ID:
303544625
10.

SD4-9

Organism:
Homo sapiens
Source name:
K562 cells
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3544624
ID:
303544624
11.

SD3-7

Organism:
Homo sapiens
Source name:
K563 cells
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3544623
ID:
303544623
12.

SD3-2

Organism:
Homo sapiens
Source name:
K562 cells
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3544622
ID:
303544622
13.

SD1-29

Organism:
Homo sapiens
Source name:
K562 cells
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3544621
ID:
303544621
14.

Mock transfected cells 4

Organism:
Homo sapiens
Source name:
K562 cells
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3544620
ID:
303544620
15.

SD11-2

Organism:
Homo sapiens
Source name:
clone containing segmental deletion of Repeat B+C
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3381523
ID:
303381523
16.

SD10-2

Organism:
Homo sapiens
Source name:
clone containing segmental deletion of Repeat D
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3381522
ID:
303381522
17.

SD9-42

Organism:
Homo sapiens
Source name:
clone containing segmental deletion of Repeat A
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3381521
ID:
303381521
18.

SD9-33

Organism:
Homo sapiens
Source name:
clone containing segmental deletion of Repeat A
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3381520
ID:
303381520
19.

SD8-7

Organism:
Homo sapiens
Source name:
clone containing segmental deletion of exon 6
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3381519
ID:
303381519
20.

SD6-10

Organism:
Homo sapiens
Source name:
clone containing segmental deletion of 3' splice site of exon 5
Platform:
GPL16791
Series:
GSE65830
Download data: TXT
Sample
Accession:
GSM3381517
ID:
303381517
Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

db=gds|term=GSE65830[Accession]|query=1|qty=2|blobid=MCID_65dc564322cedd048f3a7752|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
   Taxonomic Groups  [List]
Tree placeholder
    Top Organisms  [Tree]

Find related data

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center