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Items: 15

1.

Genome wide localization of chromatin bound NUP98-PHF23 (NP23)

(Submitter supplied) We analyzed the genome wide localization of H3K4me3, H3K27me3 and the NUP98-PHF23 (with V5 tag) fusion protein which binds H3K4me3 via its PHD finger, using ChIP-seq. Results correlated with gene expression profiles. NUP98-PHF23 bound only 1.6% of H3K4me3 marks including Hoxa/b + Meis1.
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL11002
13 Samples
Download data: BED
Series
Accession:
GSE54786
ID:
200054786

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina Genome Analyzer IIx (Mus musculus)

Organism:
Mus musculus
896 Series
7716 Samples
Download data
Platform
Accession:
GPL11002
ID:
100011002

3.

M106A Input

Organism:
Mus musculus
Source name:
106A cell line
Platform:
GPL11002
Series:
GSE54786
Download data
Sample
Accession:
GSM1323995
ID:
301323995

SRA Run Selector

4.

M106A H3K4me3

Organism:
Mus musculus
Source name:
106A cell line
Platform:
GPL11002
Series:
GSE54786
Download data: BED
Sample
Accession:
GSM1323994
ID:
301323994

SRA Run Selector

5.

M106A H3K27me3

Organism:
Mus musculus
Source name:
106A cell line
Platform:
GPL11002
Series:
GSE54786
Download data: BED
Sample
Accession:
GSM1323993
ID:
301323993

SRA Run Selector

6.

961C Input

Organism:
Mus musculus
Source name:
961C cell line
Platform:
GPL11002
Series:
GSE54786
Download data
Sample
Accession:
GSM1323992
ID:
301323992

SRA Run Selector

7.

961C-V5 NP23

Organism:
Mus musculus
Source name:
961C cell line
Platform:
GPL11002
Series:
GSE54786
Download data: BED
Sample
Accession:
GSM1323991
ID:
301323991

SRA Run Selector

8.

961C H3K4me3

Organism:
Mus musculus
Source name:
961C cell line
Platform:
GPL11002
Series:
GSE54786
Download data: BED
Sample
Accession:
GSM1323990
ID:
301323990

SRA Run Selector

9.

961C H3K27me3

Organism:
Mus musculus
Source name:
961C cell line
Platform:
GPL11002
Series:
GSE54786
Download data: BED
Sample
Accession:
GSM1323989
ID:
301323989

SRA Run Selector

10.

748T Input

Organism:
Mus musculus
Source name:
748T cell line
Platform:
GPL11002
Series:
GSE54786
Download data
Sample
Accession:
GSM1323988
ID:
301323988

SRA Run Selector

11.

748T H3K4me3

Organism:
Mus musculus
Source name:
748T cell line
Platform:
GPL11002
Series:
GSE54786
Download data: BED
Sample
Accession:
GSM1323987
ID:
301323987

SRA Run Selector

12.

748T H3K27me3

Organism:
Mus musculus
Source name:
748T cell line
Platform:
GPL11002
Series:
GSE54786
Download data: BED
Sample
Accession:
GSM1323986
ID:
301323986

SRA Run Selector

13.

7298-2 Input

Organism:
Mus musculus
Source name:
7298/2 cell line
Platform:
GPL11002
Series:
GSE54786
Download data
Sample
Accession:
GSM1323985
ID:
301323985

SRA Run Selector

14.

7298-2 H3K4me3

Organism:
Mus musculus
Source name:
7298/2 cell line
Platform:
GPL11002
Series:
GSE54786
Download data: BED
Sample
Accession:
GSM1323984
ID:
301323984

SRA Run Selector

15.

7298-2 H3K27me3

Organism:
Mus musculus
Source name:
7298/2 cell line
Platform:
GPL11002
Series:
GSE54786
Download data: BED
Sample
Accession:
GSM1323983
ID:
301323983

SRA Run Selector

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db=gds|term=GSE54786[Accession]|query=1|qty=2|blobid=MCID_675aa6b8532d590a6f2bb497|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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