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Items: 11

1.

Aberrant chromatin acetylation in MLL-AF9 leukemia mediates the response to HDAC inhibition (ChIP-Seq)

(Submitter supplied) We studied the chromatin modification patterns induced by the presence of the MLL-AF9 fusion protein in a model of human hematopoietic stem/progenitor cells (HSPC) transduced with retrovirus expressing MLL-AF9cDNA (HSPC-MA9). Comparative ChIP-seq analysis between HSPC-MA9 and control HSPC, revealed a massive hyperacetylation of histones that was consistent with the transcriptional profile in the presence of MLL-AF9 fusion protein. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL10999
9 Samples
Download data: BED, WIG
Series
Accession:
GSE54344
ID:
200054344
2.

Illumina Genome Analyzer IIx (Homo sapiens)

Platform
Accession:
GPL10999
ID:
100010999
3.

Input DNA

Organism:
Homo sapiens
Source name:
umbilical cord blood
Platform:
GPL10999
Series:
GSE54344 GSE54348
Download data
Sample
Accession:
GSM1313530
ID:
301313530
4.

H4ac_HSPCcells_ChIPseq

Organism:
Homo sapiens
Source name:
umbilical cord blood
Platform:
GPL10999
Series:
GSE54344 GSE54348
Download data: WIG
Sample
Accession:
GSM1313529
ID:
301313529
5.

H3K79me2_HSPCcells_ChIPseq

Organism:
Homo sapiens
Source name:
umbilical cord blood
Platform:
GPL10999
Series:
GSE54344 GSE54348
Download data: WIG
Sample
Accession:
GSM1313528
ID:
301313528
6.

H3K4me3_HSPCcells_ChIPseq

Organism:
Homo sapiens
Source name:
umbilical cord blood
Platform:
GPL10999
Series:
GSE54344 GSE54348
Download data: WIG
Sample
Accession:
GSM1313527
ID:
301313527
7.

H4ac_HSPC-MA9cells_ChIPseq

Organism:
Homo sapiens
Source name:
umbilical cord blood
Platform:
GPL10999
Series:
GSE54344 GSE54348
Download data: WIG
Sample
Accession:
GSM1313526
ID:
301313526
8.

H3K79me2_HSPC-MA9cells_ChIPseq

Organism:
Homo sapiens
Source name:
umbilical cord blood
Platform:
GPL10999
Series:
GSE54344 GSE54348
Download data: WIG
Sample
Accession:
GSM1313525
ID:
301313525
9.

H3K4me3_HSPC-MA9cells_ChIPseq

Organism:
Homo sapiens
Source name:
umbilical cord blood
Platform:
GPL10999
Series:
GSE54344 GSE54348
Download data: WIG
Sample
Accession:
GSM1313524
ID:
301313524
10.

AF9_HSPC-MA9cells_ChIPseq

Organism:
Homo sapiens
Source name:
umbilical cord blood
Platform:
GPL10999
Series:
GSE54344 GSE54348
Download data: BED
Sample
Accession:
GSM1313523
ID:
301313523
11.

MLL_HSPC-MA9cells_ChIPseq

Organism:
Homo sapiens
Source name:
umbilical cord blood
Platform:
GPL10999
Series:
GSE54344 GSE54348
Download data: BED
Sample
Accession:
GSM1313522
ID:
301313522
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Supplemental Content

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