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Items: 4

1.

EDD: a program for detection of wide genomic enrichment domains robust against local variations [RNA-Seq]

(Submitter supplied) Nuclear lamins contact the genome at the nuclear periphery through large domains and are involved in chromatin organization. Among broad peak calling algorithms available to date, none are suited for mapping lamin-genome interactions genome-wide. We disclose a novel algorithm, Enriched Domain Detector (EDD), for analysis of broad enrichment domains from ChIP-seq data. EDD enables discovery of genomic domains interacting with broadly distributed chromatin-associated proteins such as lamins. more...
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL16791
2 Samples
Download data: CSV
2.

Illumina HiSeq 2500 (Homo sapiens)

Platform
Accession:
GPL16791
ID:
100016791
3.

ADF04DF RNA-Seq

Organism:
Homo sapiens
Source name:
normal primary dermal fibroblasts
Platform:
GPL16791
Series:
GSE54333 GSE54334
Download data: CSV
Sample
Accession:
GSM1313403
ID:
301313403
4.

LDF RNA-Seq

Organism:
Homo sapiens
Source name:
normal dermal fibroblasts
Platform:
GPL16791
Series:
GSE54333 GSE54334
Download data: CSV
Sample
Accession:
GSM1313402
ID:
301313402
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Supplemental Content

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