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Items: 18

1.

CIITA regulated genes in human B cells

(Submitter supplied) The MHC class II transactivator (CIITA) is essential for the expression of MHC-II genes. CIITA functions as a transcriptional activator when bound to genes although repressive roles have been reported at some loci in other cell types. To define the role of CIITA in gene regulation in human B cells, we performed ChIP-seq for CIITA using three independent antibodies, the histone marks H3K4me3 and H3K27ac, and ATAC-seq in the Raji human B cell line. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL16791 GPL11154
15 Samples
Download data: BED, BIGWIG, TXT
Series
Accession:
GSE52941
ID:
200052941
2.

Illumina HiSeq 2500 (Homo sapiens)

Platform
Accession:
GPL16791
ID:
100016791
3.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
4.

Raji Input

Organism:
Homo sapiens
Source name:
Raji cells
Platform:
GPL11154
Series:
GSE52941
Download data: BIGWIG
Sample
Accession:
GSM1602242
ID:
301602242
5.

Raji H3K4me3

Organism:
Homo sapiens
Source name:
Raji cells
Platform:
GPL11154
Series:
GSE52941
Download data: BIGWIG
Sample
Accession:
GSM1602241
ID:
301602241
6.

Raji CIITA Boss Lab

Organism:
Homo sapiens
Source name:
Raji cells
Platform:
GPL11154
Series:
GSE52941
Download data: BED, BIGWIG
Sample
Accession:
GSM1602232
ID:
301602232
7.

RJ2.2.5 ATACseq (paired-end)

Organism:
Homo sapiens
Source name:
RJ2.2.5 cells
Platform:
GPL16791
Series:
GSE52941
Download data
Sample
Accession:
GSM1602246
ID:
301602246
8.

RJ2.2.5 ATACseq

Organism:
Homo sapiens
Source name:
RJ2.2.5 cells
Platform:
GPL16791
Series:
GSE52941
Download data: BIGWIG
Sample
Accession:
GSM1602245
ID:
301602245
9.

Raji ATACseq (paired-end)

Organism:
Homo sapiens
Source name:
Raji cells
Platform:
GPL16791
Series:
GSE52941
Download data
Sample
Accession:
GSM1602244
ID:
301602244
10.

Raji ATACseq

Organism:
Homo sapiens
Source name:
Raji cells
Platform:
GPL16791
Series:
GSE52941
Download data: BIGWIG
Sample
Accession:
GSM1602243
ID:
301602243
11.

RJ2.2.5 H3K27ac rep2

Organism:
Homo sapiens
Source name:
RJ2.2.5 cells
Platform:
GPL16791
Series:
GSE52941
Download data: BIGWIG
Sample
Accession:
GSM1602240
ID:
301602240
12.

RJ2.2.5 H3K27ac rep1

Organism:
Homo sapiens
Source name:
RJ2.2.5 cells
Platform:
GPL16791
Series:
GSE52941
Download data: BIGWIG
Sample
Accession:
GSM1602239
ID:
301602239
13.

Raji H3K27ac rep2

Organism:
Homo sapiens
Source name:
Raji cells
Platform:
GPL16791
Series:
GSE52941
Download data: BIGWIG
Sample
Accession:
GSM1602238
ID:
301602238
14.

Raji H3K27ac rep1

Organism:
Homo sapiens
Source name:
Raji cells
Platform:
GPL16791
Series:
GSE52941
Download data: BIGWIG
Sample
Accession:
GSM1602237
ID:
301602237
15.

Raji CIITA Diagenode rep2

Organism:
Homo sapiens
Source name:
Raji cells
Platform:
GPL16791
Series:
GSE52941
Download data: BED, BIGWIG
Sample
Accession:
GSM1602236
ID:
301602236
16.

Raji CIITA Diagenode rep1

Organism:
Homo sapiens
Source name:
Raji cells
Platform:
GPL16791
Series:
GSE52941
Download data: BED, BIGWIG
Sample
Accession:
GSM1602235
ID:
301602235
17.

Raji CIITA Rockland rep2

Organism:
Homo sapiens
Source name:
Raji cells
Platform:
GPL16791
Series:
GSE52941
Download data: BED, BIGWIG
Sample
Accession:
GSM1602234
ID:
301602234
18.

Raji CIITA Rockland rep1

Organism:
Homo sapiens
Source name:
Raji cells
Platform:
GPL16791
Series:
GSE52941
Download data: BED, BIGWIG
Sample
Accession:
GSM1602233
ID:
301602233
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Supplemental Content

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