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Items: 6

1.

Next Generation Sequencing Facilitates Quantitative Analysis of effect of knockdown of GATA2 on AR binding sites

(Submitter supplied) Purpose: Next-generation sequencing (NGS) has revolutionized systems-based analysis of cellular pathways. The goals of this study are to compare AR binding activity in LNCaP cells with and without knockdown of GATA2. Methods: LNCaP cells between passage number 32-34 were used for assay. Cells are transfected with GATA2 specific or nonspecific siRNA and ChIP was performed, the ChIP producted was further used to generate library with illumina ChIP-seq kit. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL16791
4 Samples
Download data: WIG
Series
Accession:
GSE52725
ID:
200052725
2.

Illumina HiSeq 2500 (Homo sapiens)

Platform
Accession:
GPL16791
ID:
100016791
3.

GATA2_ChIP Seq

Organism:
Homo sapiens
Source name:
prostate cell line
Platform:
GPL16791
Series:
GSE52725
Download data: WIG
Sample
Accession:
GSM1600544
ID:
301600544
4.

FoxA1_ChIP Seq

Organism:
Homo sapiens
Source name:
prostate cell line
Platform:
GPL16791
Series:
GSE52725
Download data: WIG
Sample
Accession:
GSM1274873
ID:
301274873
5.

siGATA2-AR_ChIP Seq

Organism:
Homo sapiens
Source name:
prostate cell line
Platform:
GPL16791
Series:
GSE52725
Download data: WIG
Sample
Accession:
GSM1274872
ID:
301274872
6.

siControl-AR_ChIP Seq

Organism:
Homo sapiens
Source name:
prostate cell line
Platform:
GPL16791
Series:
GSE52725
Download data: WIG
Sample
Accession:
GSM1274871
ID:
301274871
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Supplemental Content

db=gds|term=GSE52725[Accession]|query=1|qty=2|blobid=MCID_65dd9b0222cedd048f5add79|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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