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Items: 1 to 20 of 58

1.

Identification and systematic annotation of tissue-specific differentially methylated regions using the Illumina 450k array

(Submitter supplied) Background DNA methylation has been recognized as a key mechanism in cell differentiation. Various studies have compared tissues to characterize epigenetically regulated genomic regions, but due to differences in study design and focus there still is no consensus as to the annotation of genomic regions predominantly involved in tissue-specific methylation. We used a new algorithm to identify and annotate tissue-specific Differentially Methylated Regions (tDMRs) in Illumina 450k chip data on four peripheral (blood, saliva, buccal swab and hair follicles) and six internal tissues (liver, muscle, pancreas, subcutaneous fat, omentum, spleen with matched blood samples). more...
Organism:
Homo sapiens
Type:
Methylation profiling by genome tiling array
Platform:
GPL13534
56 Samples
Download data: IDAT, TXT
Series
Accession:
GSE48472
ID:
200048472

PubMed Full text in PMC Similar studies Analyze with GEO2R

2.

Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)

(Submitter supplied) 1 difference between HumanMethylation450_15017482_v.1.1.bpm and HumanMethylation450_15017482_v.1.2.bpm: 1.1: 41636384,NEGATIVE,-99,Negative 604 1.2: 41636384,RESTORATION,Green,Restore Protocol: See manufacturer's website
Organism:
Homo sapiens
1647 Series
1 Related Platform
117274 Samples
Download data: BPM, CSV, TXT, XLSX
Platform
Accession:
GPL13534
ID:
100013534

3.

Saliva_PT5

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179552
ID:
301179552

4.

Saliva_PT4

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179551
ID:
301179551

5.

Saliva_PT3

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179550
ID:
301179550

6.

Saliva_PT2

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179549
ID:
301179549

7.

Saliva_PT1

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179548
ID:
301179548

8.

Hair_PT5

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179547
ID:
301179547

9.

Hair_PT4

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179546
ID:
301179546

10.

Hair_PT3

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179545
ID:
301179545

11.

Hair_PT2

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179544
ID:
301179544

12.

Hair_PT1

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179543
ID:
301179543

13.

Buccal_PT5

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179542
ID:
301179542

14.

Buccal_PT4

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179541
ID:
301179541

15.

Buccal_PT3

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179540
ID:
301179540

16.

Buccal_PT2

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179539
ID:
301179539

17.

Buccal_PT1

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179538
ID:
301179538

18.

Blood_PT5

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179537
ID:
301179537

19.

Blood_PT4

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179536
ID:
301179536

20.

Blood_PT3

Organism:
Homo sapiens
Source name:
Healthy individuals
Platform:
GPL13534
Series:
GSE48472
Download data: IDAT
Sample
Accession:
GSM1179535
ID:
301179535

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