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Items: 8

1.

Orchestrated intron retention regulates normal granulocyte differentiation [Affymetrix arrays]

(Submitter supplied) Using mRNA-seq, we determined intron retaining genes that were differentially regulated in FACS purified cells at three progressive stages of mouse granulopoiesis; CD34+Kit+Gr-1low promyelocytes, CD34-Kit-Gr-1mid myelocytes and CD34-Kit-Gr-1high granulocytes. We found that IR affects 86 genes, including those specific to granulocyte (Lyz2 and MMP8) and nuclear architecture (Lmnb1 and Lbr). IR was associated with the decrease in protein levels measured by mass spectrometry (P=0.0015, binomial test). more...
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL6246
6 Samples
Download data: CEL
Series
Accession:
GSE48306
ID:
200048306
2.

[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 07, 2012: annotation table updated with netaffx build 32 July 01, 2016: annotation table updated with netaffx build 35 Protocol: See manufacturer's web site
Organism:
Mus musculus
143 DataSets
2504 Series
28 Related Platforms
30419 Samples
Download data
Platform
Accession:
GPL6246
ID:
100006246
3.

caffeine- 3

Organism:
Mus musculus
Source name:
granulocytes not treated with caffeine
Platform:
GPL6246
Series:
GSE48306 GSE48307
Download data: CEL
Sample
Accession:
GSM1174479
ID:
301174479
4.

caffeine- 2

Organism:
Mus musculus
Source name:
granulocytes not treated with caffeine
Platform:
GPL6246
Series:
GSE48306 GSE48307
Download data: CEL
Sample
Accession:
GSM1174478
ID:
301174478
5.

caffeine- 1

Organism:
Mus musculus
Source name:
granulocytes not treated with caffeine
Platform:
GPL6246
Series:
GSE48306 GSE48307
Download data: CEL
Sample
Accession:
GSM1174477
ID:
301174477
6.

caffeine+ 3

Organism:
Mus musculus
Source name:
granulocytes treated with caffeine
Platform:
GPL6246
Series:
GSE48306 GSE48307
Download data: CEL
Sample
Accession:
GSM1174476
ID:
301174476
7.

caffeine+ 2

Organism:
Mus musculus
Source name:
granulocytes treated with caffeine
Platform:
GPL6246
Series:
GSE48306 GSE48307
Download data: CEL
Sample
Accession:
GSM1174475
ID:
301174475
8.

caffeine+ 1

Organism:
Mus musculus
Source name:
granulocytes treated with caffeine
Platform:
GPL6246
Series:
GSE48306 GSE48307
Download data: CEL
Sample
Accession:
GSM1174474
ID:
301174474
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Supplemental Content

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