GSE47142[Accession] - GEO DataSets - NCBI

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Select item 2000471421.

CLK:BMAL1 is a pioneer-like transcription factor [MNase-Seq]

(Submitter supplied) The mammalian circadian clock relies on the master genes CLOCK (CLK) and BMAL1 and drives rhythmic gene expression to regulate biological functions under circadian control. We recently uncovered a surprising disconnect between the rhythmic binding of CLK:BMAL1 on DNA and the transcription of its target genes, suggesting that they are regulated by as yet uncharacterized mechanisms. Here we show that rhythmic CLK:BMAL1 DNA binding promotes rhythmic chromatin opening. more...

Organism:: Mus musculus

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL13112
47 Samples

Download data: BW, TXT

Series

Accession:: GSE47142

ID:: 200047142

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000131122.

Illumina HiSeq 2000 (Mus musculus)

Organism:: Mus musculus

8084 Series
183933 Samples

Platform

Accession:: GPL13112

ID:: 100013112

Select item 3011456683.

Mnase_BM10_ZT22

Organism:: Mus musculus

Source name:: Mnase_BM10_ZT22

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145668

ID:: 301145668

SRA Run Selector

Select item 3011456674.

Mnase_BM10_ZT18

Organism:: Mus musculus

Source name:: Mnase_BM10_ZT18

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145667

ID:: 301145667

SRA Run Selector

Select item 3011456665.

Mnase_BM10_ZT14

Organism:: Mus musculus

Source name:: Mnase_BM10_ZT14

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145666

ID:: 301145666

SRA Run Selector

Select item 3011456656.

Mnase_BM10_ZT10

Organism:: Mus musculus

Source name:: Mnase_BM10_ZT10

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145665

ID:: 301145665

SRA Run Selector

Select item 3011456647.

Mnase_BM10_ZT06

Organism:: Mus musculus

Source name:: Mnase_BM10_ZT06

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145664

ID:: 301145664

SRA Run Selector

Select item 3011456638.

Mnase_BM10_ZT02

Organism:: Mus musculus

Source name:: Mnase_BM10_ZT02

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145663

ID:: 301145663

SRA Run Selector

Select item 3011456629.

Organism:: Mus musculus

Source name:: Mnase_BM9_ZT22

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145662

ID:: 301145662

SRA Run Selector

Select item 30114566110.

Organism:: Mus musculus

Source name:: Mnase_BM9_ZT18

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145661

ID:: 301145661

SRA Run Selector

Select item 30114566011.

Organism:: Mus musculus

Source name:: Mnase_BM9_ZT14

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145660

ID:: 301145660

SRA Run Selector

Select item 30114565912.

Organism:: Mus musculus

Source name:: Mnase_BM9_ZT10

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145659

ID:: 301145659

SRA Run Selector

Select item 30114565813.

Organism:: Mus musculus

Source name:: Mnase_BM9_ZT06

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145658

ID:: 301145658

SRA Run Selector

Select item 30114565714.

Organism:: Mus musculus

Source name:: Mnase_BM9_ZT02

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145657

ID:: 301145657

SRA Run Selector

Select item 30114565615.

Organism:: Mus musculus

Source name:: Mnase_BM8_ZT18

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145656

ID:: 301145656

SRA Run Selector

Select item 30114565516.

Organism:: Mus musculus

Source name:: Mnase_BM8_ZT14

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145655

ID:: 301145655

SRA Run Selector

Select item 30114565417.

Organism:: Mus musculus

Source name:: Mnase_BM8_ZT10

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145654

ID:: 301145654

SRA Run Selector

Select item 30114565318.

Organism:: Mus musculus

Source name:: Mnase_BM8_ZT06

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145653

ID:: 301145653

SRA Run Selector

Select item 30114565219.

Organism:: Mus musculus

Source name:: Mnase_BM8_ZT02

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145652

ID:: 301145652

SRA Run Selector

Select item 30114565120.

Organism:: Mus musculus

Source name:: Mnase_BM5_ZT22

Platform:: GPL13112
Series:: GSE47142 GSE47145

Sample

Accession:: GSM1145651

ID:: 301145651

SRA Run Selector

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