GSE46953[Accession] - GEO DataSets - NCBI

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Items: 6

Select item 2000469531.

Default DNA Methylation is Preceded by Broad, Low-Level Transcription in Fetal Male Germ Cells and Is Inversely Patterned by Dynamic H3K4 Methylation (RNA-Seq)

(Submitter supplied) To understand what dictates the emerging patterns of de novo DNA methylation, we mapped DNA methylation, chromatin, and transcription changes in purified fetal mouse germ cells using MIRA-chip, ChIP-chip, and strand-specific RNA-seq, respectively. De novo methylation occurred without any apparent trigger from preexisting repressing chromatin marks but was preceded by broad, low-level transcription along the entire genome in prospermatogonia. more...

Organism:: Mus musculus

Type:: Expression profiling by high throughput sequencing

Platform:: GPL13112
4 Samples

Download data: BEDGRAPH, TXT

Series

Accession:: GSE46953

ID:: 200046953

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000131122.

Illumina HiSeq 2000 (Mus musculus)

Organism:: Mus musculus

8075 Series
183806 Samples

Platform

Accession:: GPL13112

ID:: 100013112

Select item 3011426023.

RNA in the female somatic cells at 15.5 dpc

Organism:: Mus musculus

Source name:: fetal female somatic gonadal cells at 15.5 dpc

Platform:: GPL13112
Series:: GSE46953 GSE46954

Download data: BEDGRAPH, TXT

Sample

Accession:: GSM1142602

ID:: 301142602

SRA Run Selector

Select item 3011426014.

RNA in the male somatic cells at 15.5 dpc

Organism:: Mus musculus

Source name:: fetal male somatic gonadal cells at 15.5 dpc

Platform:: GPL13112
Series:: GSE46953 GSE46954

Download data: BEDGRAPH, TXT

Sample

Accession:: GSM1142601

ID:: 301142601

SRA Run Selector

Select item 3011426005.

RNA in the female germ cells at 15.5 dpc

Organism:: Mus musculus

Source name:: fetal female germ cells at 15.5 dpc

Platform:: GPL13112
Series:: GSE46953 GSE46954

Download data: BEDGRAPH, TXT

Sample

Accession:: GSM1142600

ID:: 301142600

SRA Run Selector

Select item 3011425996.

RNA in the male germ cells at 15.5 dpc

Organism:: Mus musculus

Source name:: fetal male germ cells at 15.5 dpc

Platform:: GPL13112
Series:: GSE46953 GSE46954

Download data: BEDGRAPH, TXT

Sample

Accession:: GSM1142599

ID:: 301142599

SRA Run Selector

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GSE46953[Accession] (6)
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