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Items: 10

1.

The Kdm5c histone demethylase controls enhancer and promoter function.

(Submitter supplied) Here, we show that the Kdm5c/Smcx member of the Jarid1 family of H3K4 demethylases is recruited to both enhancer and core promoter elements in ES and neuronal progenitor cells (NPC). Knockdown of Kdm5c deregulates transcription via a local increase in H3K4me3. While at core promoters the function of Kdm5c is to restrict transcription, loss of Kdm5c impairs enhancer function. Remarkably, an impaired enhancer function activates promoter activity from Kdm5c-bound intergenic regions. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL13112
8 Samples
Download data: WIG
Series
Accession:
GSE34975
ID:
200034975

PubMed Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Mus musculus)

Organism:
Mus musculus
8068 Series
183776 Samples
Download data
Platform
Accession:
GPL13112
ID:
100013112

3.

H3K4me3_ChIP_sh non targeting

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE34975
Download data: WIG
Sample
Accession:
GSM859667
ID:
300859667

SRA Run Selector

4.

H3K4me3_ChIP_KDM5C_KD_sh3813

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE34975
Download data: WIG
Sample
Accession:
GSM859666
ID:
300859666

SRA Run Selector

5.

H3K4me1_ChIP_sh non targeting

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE34975
Download data: WIG
Sample
Accession:
GSM859665
ID:
300859665

SRA Run Selector

6.

H3K4me1_ChIP_KDM5C_KD_sh3813

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE34975
Download data: WIG
Sample
Accession:
GSM859664
ID:
300859664

SRA Run Selector

7.

BirA_ChIP_NPC

Organism:
Mus musculus
Source name:
neuronal progenitor cells
Platform:
GPL13112
Series:
GSE34975
Download data
Sample
Accession:
GSM859663
ID:
300859663

SRA Run Selector

8.

KDM5C_ChIP_NPC

Organism:
Mus musculus
Source name:
neuronal progenitor cells
Platform:
GPL13112
Series:
GSE34975
Download data: WIG
Sample
Accession:
GSM859662
ID:
300859662

SRA Run Selector

9.

BirA_ChIP_ES

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE34975
Download data
Sample
Accession:
GSM859661
ID:
300859661

SRA Run Selector

10.

KDM5C_ChIP_ES

Organism:
Mus musculus
Source name:
embryonic stem cells
Platform:
GPL13112
Series:
GSE34975
Download data: WIG
Sample
Accession:
GSM859660
ID:
300859660

SRA Run Selector

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db=gds|term=GSE34975[Accession]|query=1|qty=2|blobid=MCID_65696309b583903710468dd8|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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