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Items: 1 to 20 of 70

1.

Mutations in IDH1 and IDH2 are associated with DNA hypermethylation in intrahepatic cholangiocarcinomas

(Submitter supplied) We compared the DNA methylation profiles of 12 intrahepatic cholangiocarcinomas harboring mutations in the genes encoding isocitrate dehydrogenase, IDH1 and IDH2, with 28 intrahepatic cholangiocarcinomas without these mutations. We profiled these samples with the Illumina HumanMethylation450 BeadChip, and characterized over 2,000 genes that were hypermethylated in tumors with mutations in IDH1 or IDH2.
Organism:
Homo sapiens
Type:
Methylation profiling by genome tiling array
Platform:
GPL13534
68 Samples
Download data: TXT
Series
Accession:
GSE32079
ID:
200032079

PubMed Full text in PMC Similar studies Analyze with GEO2R

2.

Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)

(Submitter supplied) 1 difference between HumanMethylation450_15017482_v.1.1.bpm and HumanMethylation450_15017482_v.1.2.bpm: 1.1: 41636384,NEGATIVE,-99,Negative 604 1.2: 41636384,RESTORATION,Green,Restore Protocol: See manufacturer's website
Organism:
Homo sapiens
1645 Series
1 Related Platform
117272 Samples
Download data: BPM, CSV, TXT, XLSX
Platform
Accession:
GPL13534
ID:
100013534

3.

HCT116_DMSO_72hr_rep6

Organism:
Homo sapiens
Source name:
Genomic DNA from colorectal cancer cell line HCT116 treated with 1 micromolar 5-azacytidine
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM853937
ID:
300853937

4.

Cholangiocarcinoma Q10_MayoCC049T

Organism:
Homo sapiens
Source name:
Genomic DNA from Cholangiocarcinoma Q10_MayoCC049T
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM853936
ID:
300853936

5.

Cholangiocarcinoma Q09_MayoCC027T

Organism:
Homo sapiens
Source name:
Genomic DNA from Cholangiocarcinoma Q09_MayoCC027T
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM853935
ID:
300853935

6.

Cholangiocarcinoma Q08_MayoCC033T

Organism:
Homo sapiens
Source name:
Genomic DNA from Cholangiocarcinoma Q08_MayoCC033T
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM853934
ID:
300853934

7.

Cholangiocarcinoma Q04_MayoCC045T

Organism:
Homo sapiens
Source name:
Genomic DNA from Cholangiocarcinoma Q04_MayoCC045T
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM853933
ID:
300853933

8.

Cholangiocarcinoma Q07_MayoCC043T

Organism:
Homo sapiens
Source name:
Genomic DNA from Cholangiocarcinoma Q07_MayoCC043T
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM853932
ID:
300853932

9.

Cholangiocarcinoma Q01_MayoCC047T

Organism:
Homo sapiens
Source name:
Genomic DNA from Cholangiocarcinoma Q01_MayoCC047T
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM853931
ID:
300853931

10.

Cholangiocarcinoma Q11_MayoCC026T

Organism:
Homo sapiens
Source name:
Genomic DNA from Cholangiocarcinoma Q11_MayoCC026T
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM853930
ID:
300853930

11.

Cholangiocarcinoma Q03_MayoCC019T

Organism:
Homo sapiens
Source name:
Genomic DNA from Cholangiocarcinoma Q03_MayoCC019T
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM853929
ID:
300853929

12.

Cholangiocarcinoma Q12_MayoCC003T

Organism:
Homo sapiens
Source name:
Genomic DNA from Cholangiocarcinoma Q12_MayoCC003T
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM853928
ID:
300853928

13.

Cholangiocarcinoma Q02_MayoCC002T

Organism:
Homo sapiens
Source name:
Genomic DNA from Cholangiocarcinoma Q02_MayoCC002T
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM853927
ID:
300853927

14.

HCT116_DKO_rep4_cholangiocarcinoma_study

Organism:
Homo sapiens
Source name:
Genomic DNA from HCT116 DNMT1;DNMT3 double knockout cell line
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM795411
ID:
300795411

15.

SssI_Methylated_rep4_cholangiocarcinoma_study

Organism:
Homo sapiens
Source name:
Genomic DNA from HCT116 DNMT1;DNMT3 double knockout cell line, treated with M.SssI CpG methyltransferase
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM795410
ID:
300795410

16.

HCT116_DKO_rep3_cholangiocarcinoma_study

Organism:
Homo sapiens
Source name:
Genomic DNA from HCT116 DNMT1;DNMT3 double knockout cell line
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM795409
ID:
300795409

17.

SssI_Methylated_rep3_cholangiocarcinoma_study

Organism:
Homo sapiens
Source name:
Genomic DNA from HCT116 DNMT1;DNMT3 double knockout cell line, treated with M.SssI CpG methyltransferase
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM795408
ID:
300795408

18.

HCT116_DKO_rep2_cholangiocarcinoma_study

Organism:
Homo sapiens
Source name:
Genomic DNA from HCT116 DNMT1;DNMT3 double knockout cell line
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM795407
ID:
300795407

19.

SssI_Methylated_rep2_cholangiocarcinoma_study

Organism:
Homo sapiens
Source name:
Genomic DNA from HCT116 DNMT1;DNMT3 double knockout cell line, treated with M.SssI CpG methyltransferase
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM795406
ID:
300795406

20.

HCT116_DKO_rep1_cholangiocarcinoma_study

Organism:
Homo sapiens
Source name:
Genomic DNA from HCT116 DNMT1;DNMT3 double knockout cell line
Platform:
GPL13534
Series:
GSE32079 GSE32286
Download data
Sample
Accession:
GSM795405
ID:
300795405

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