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Items: 1 to 20 of 382

1.

Prospective comparison of genome-wide aCGH platforms for the detection of CNVs in MR

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Genome variation profiling by SNP array; SNP genotyping by SNP array; Genome variation profiling by genome tiling array
6 related Platforms
375 Samples
Download data: CEL, CHP, PAIR, TXT
Series
Accession:
GSE27367
ID:
200027367
2.

WiCell HG18 WG CGH 385K v2

(Submitter supplied) Single array CGH design for whole human genome (hg18; NCBI Build 36). Probes selected from hg18_tiling database using 6000 bp interval and 250 bp window. Isothermal probes with min length of 50 bp and max length of 75 bp and target Tm of 76C. Cycle restricted to 148 synthesis cycles. Interval spacing: 6253 bp (mean); 6270 bp (median). 3553 random probes added. Includes pseudo-autosomal regions from chrX and chrY, though the counts for those regions have been changed to 1 to allow standard analysis.
Organism:
Homo sapiens
4 Series
192 Samples
Download data: NDF
Platform
Accession:
GPL7717
ID:
100007717
3.

[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 (ucsc=hg18; ncbi=NCBI36) August 01, 2012: annotation table updated with netaffx build 32 (ucsc=hg19; ncbi=GRCh37) Protocol: see manufacturer's web site The new Affymetrix® Genome-Wide Human SNP Array 6.0 features 1.8 million genetic markers, including more than 906,600 single nucleotide polymorphisms (SNPs) and more than 946,000 probes for the detection of copy number variation. more...
Organism:
Homo sapiens
404 Series
22859 Samples
Download data
Platform
Accession:
GPL6801
ID:
100006801
4.

Illumina HumanHap550 Genotyping BeadChip v1

(Submitter supplied) Version 1, Illumina Sentrix HumaHap550 Genotyping BeadChip Protocol: See manufacturer's website (http://illumina.com)
Organism:
Homo sapiens
6 Series
1 Related Platform
1539 Samples
Download data
Platform
Accession:
GPL6433
ID:
100006433
5.

Agilent-014693 Human Genome CGH Microarray 244A (Feature number version)

(Submitter supplied) This microarray is Agilent’s premium product for human DNA copy-number profiling. Over 236,000 60-mer oligonucleotide probes, specifically optimized for copy-number measurement, span coding and non-coding genomic sequences with median spacing of 7.4 kb and 16.5 kb respectively. This microarray is designed for use with Agilent’s optimized assay protocols, enabling researchers to use nanogram levels of total genomic DNA without complexity reduction. more...
Organism:
Homo sapiens
113 Series
1 Related Platform
2690 Samples
Download data
Platform
Accession:
GPL4091
ID:
100004091
6.

[Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Mapping 500K Array Set provides consistently high coverage across different populations. It is comprised of two arrays, each capable of genotyping on average 250,000 SNPs (approximately 262,000 for Nsp arrays and 238,000 for Sty arrays). more...
Organism:
Homo sapiens
150 Series
9570 Samples
Download data
Platform
Accession:
GPL3720
ID:
100003720
7.

[Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Mapping 500K Array Set provides consistently high coverage across different populations. It is comprised of two arrays, each capable of genotyping on average 250,000 SNPs (approximately 262,000 for Nsp arrays and 238,000 for Sty arrays). more...
Organism:
Homo sapiens
193 Series
11192 Samples
Download data
Platform
Accession:
GPL3718
ID:
100003718
8.

9313_Child_Mother (GenomeWideSNP_6)

Organism:
Homo sapiens
Source name:
peripheral blood
Platform:
GPL6801
Series:
GSE27145 GSE27367
Download data: CEL, CHP
Sample
Accession:
GSM670896
ID:
300670896
9.

9313_Child_Father (GenomeWideSNP_6)

Organism:
Homo sapiens
Source name:
peripheral blood
Platform:
GPL6801
Series:
GSE27145 GSE27367
Download data: CEL, CHP
Sample
Accession:
GSM670895
ID:
300670895
10.

9313_Child (GenomeWideSNP_6)

Organism:
Homo sapiens
Source name:
peripheral blood
Platform:
GPL6801
Series:
GSE27145 GSE27367
Download data: CEL, CHP
Sample
Accession:
GSM670894
ID:
300670894
11.

8994_Child_Mother (GenomeWideSNP_6)

Organism:
Homo sapiens
Source name:
peripheral blood
Platform:
GPL6801
Series:
GSE27145 GSE27367
Download data: CEL, CHP
Sample
Accession:
GSM670893
ID:
300670893
12.

8994_Child_Father (GenomeWideSNP_6)

Organism:
Homo sapiens
Source name:
peripheral blood
Platform:
GPL6801
Series:
GSE27145 GSE27367
Download data: CEL, CHP
Sample
Accession:
GSM670892
ID:
300670892
13.

8994_Child (GenomeWideSNP_6)

Organism:
Homo sapiens
Source name:
peripheral blood
Platform:
GPL6801
Series:
GSE27145 GSE27367
Download data: CEL, CHP
Sample
Accession:
GSM670891
ID:
300670891
14.

8960_Child_Mother (GenomeWideSNP_6)

Organism:
Homo sapiens
Source name:
peripheral blood
Platform:
GPL6801
Series:
GSE27145 GSE27367
Download data: CEL, CHP
Sample
Accession:
GSM670890
ID:
300670890
15.

8960_Child_Father (GenomeWideSNP_6)

Organism:
Homo sapiens
Source name:
peripheral blood
Platform:
GPL6801
Series:
GSE27145 GSE27367
Download data: CEL, CHP
Sample
Accession:
GSM670889
ID:
300670889
16.

8960_Child (GenomeWideSNP_6)

Organism:
Homo sapiens
Source name:
peripheral blood
Platform:
GPL6801
Series:
GSE27145 GSE27367
Download data: CEL, CHP
Sample
Accession:
GSM670888
ID:
300670888
17.

8612_Child_Mother (GenomeWideSNP_6)

Organism:
Homo sapiens
Source name:
peripheral blood
Platform:
GPL6801
Series:
GSE27145 GSE27367
Download data: CEL, CHP
Sample
Accession:
GSM670887
ID:
300670887
18.

8612_Child_Father (GenomeWideSNP_6)

Organism:
Homo sapiens
Source name:
peripheral blood
Platform:
GPL6801
Series:
GSE27145 GSE27367
Download data: CEL, CHP
Sample
Accession:
GSM670886
ID:
300670886
19.

8612_Child (GenomeWideSNP_6)

Organism:
Homo sapiens
Source name:
peripheral blood
Platform:
GPL6801
Series:
GSE27145 GSE27367
Download data: CEL, CHP
Sample
Accession:
GSM670885
ID:
300670885
20.

8327_Child_Mother (GenomeWideSNP_6)

Organism:
Homo sapiens
Source name:
peripheral blood
Platform:
GPL6801
Series:
GSE27145 GSE27367
Download data: CEL, CHP
Sample
Accession:
GSM670884
ID:
300670884
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