GSE221679[Accession] - GEO DataSets - NCBI

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Select item 2002216791.

The MOM1 complex recruits the RdDM machinery via MORC6 to establish de novo DNA methylation.

(Submitter supplied) MOM1 is an Arabidopsis factor previously shown to mediate transcriptional silencing independent of major DNA methylation changes. Here we found that MOM1 localizes with sites of RNA-directed DNA methylation (RdDM). Tethering MOM1 with artificial zinc finger to unmethylated FWA promoter led to establishment of DNA methylation and FWA silencing. This process was blocked by mutations in components of the Pol V arm of the RdDM machinery, as well as by mutation of MORC6. more...

Organism:: Arabidopsis thaliana

Type:: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other

Platforms:: GPL21785 GPL26208
125 Samples

Download data: BW, NARROWPEAK, RESULTS, TXT

Series

Accession:: GSE221679

ID:: 200221679

PubMed Full text in PMC Similar studies

Select item 1000262082.

Illumina NovaSeq 6000 (Arabidopsis thaliana)

Organism:: Arabidopsis thaliana

486 Series
8873 Samples

Platform

Accession:: GPL26208

ID:: 100026208

Select item 1000217853.

Illumina HiSeq 4000 (Arabidopsis thaliana)

Organism:: Arabidopsis thaliana

276 Series
7016 Samples

Platform

Accession:: GPL21785

ID:: 100021785

Select item 3073927734.

ChIP-seq data of MORC6-myc in pial1/2 background, T2 line3

Organism:: Arabidopsis thaliana

Source name:: floral tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW, NARROWPEAK

Sample

Accession:: GSM7392773

ID:: 307392773

SRA Run Selector

Select item 3073927725.

ChIP-seq data of MORC6-myc in pial1/2 background, T2 line2

Organism:: Arabidopsis thaliana

Source name:: floral tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW, NARROWPEAK

Sample

Accession:: GSM7392772

ID:: 307392772

SRA Run Selector

Select item 3073927716.

ChIP-seq data of MORC6-myc in pial1/2 background, T2 line1

Organism:: Arabidopsis thaliana

Source name:: floral tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW, NARROWPEAK

Sample

Accession:: GSM7392771

ID:: 307392771

SRA Run Selector

Select item 3073927707.

ChIP-seq data of MORC6-myc in mom1-3 background, T2 line3

Organism:: Arabidopsis thaliana

Source name:: floral tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW, NARROWPEAK

Sample

Accession:: GSM7392770

ID:: 307392770

SRA Run Selector

Select item 3073927698.

ChIP-seq data of MORC6-myc in mom1-3 background, T2 line2

Organism:: Arabidopsis thaliana

Source name:: floral tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW, NARROWPEAK

Sample

Accession:: GSM7392769

ID:: 307392769

SRA Run Selector

Select item 3073927689.

ChIP-seq data of MORC6-myc in mom1-3 background, T2 line1

Organism:: Arabidopsis thaliana

Source name:: floral tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW, NARROWPEAK

Sample

Accession:: GSM7392768

ID:: 307392768

SRA Run Selector

Select item 30739276710.

ChIP-seq data of MORC6-myc in Col-0 background, T2 line2

Organism:: Arabidopsis thaliana

Source name:: floral tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW, NARROWPEAK

Sample

Accession:: GSM7392767

ID:: 307392767

SRA Run Selector

Select item 30739276611.

ChIP-seq data of MORC6-myc in Col-0 background, T2 line1

Organism:: Arabidopsis thaliana

Source name:: floral tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW, NARROWPEAK

Sample

Accession:: GSM7392766

ID:: 307392766

SRA Run Selector

Select item 30739276512.

ChIP-seq data of MORC6-myc in morc6 background, T2 line3

Organism:: Arabidopsis thaliana

Source name:: floral tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW, NARROWPEAK

Sample

Accession:: GSM7392765

ID:: 307392765

SRA Run Selector

Select item 30739276413.

ChIP-seq data of MORC6-myc in morc6 background, T2 line2

Organism:: Arabidopsis thaliana

Source name:: floral tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW, NARROWPEAK

Sample

Accession:: GSM7392764

ID:: 307392764

SRA Run Selector

Select item 30731040514.

WGBS data of pial1/2 double mutant

Organism:: Arabidopsis thaliana

Source name:: rosette leaf tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW

Sample

Accession:: GSM7310405

ID:: 307310405

SRA Run Selector

Select item 30731040415.

WGBS data of suvh2/9, replicate 2

Organism:: Arabidopsis thaliana

Source name:: rosette leaf tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW

Sample

Accession:: GSM7310404

ID:: 307310404

SRA Run Selector

Select item 30731040316.

WGBS data of suvh2/9, replicate 1

Organism:: Arabidopsis thaliana

Source name:: rosette leaf tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW

Sample

Accession:: GSM7310403

ID:: 307310403

SRA Run Selector

Select item 30731040217.

WGBS data of mom1-3, replicate 2

Organism:: Arabidopsis thaliana

Source name:: rosette leaf tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW

Sample

Accession:: GSM7310402

ID:: 307310402

SRA Run Selector

Select item 30731040118.

WGBS data of mom1-3, replicate 1

Organism:: Arabidopsis thaliana

Source name:: rosette leaf tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW

Sample

Accession:: GSM7310401

ID:: 307310401

SRA Run Selector

Select item 30731040019.

WGBS data of wild type (Col-0) plant as control for mom1-3 and suvh2/9, replicate 2

Organism:: Arabidopsis thaliana

Source name:: rosette leaf tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW

Sample

Accession:: GSM7310400

ID:: 307310400

SRA Run Selector

Select item 30731039920.

WGBS data of wild type (Col-0) plant as control for mom1-3 and suvh2/9, replicate 1

Organism:: Arabidopsis thaliana

Source name:: rosette leaf tissue

Platform:: GPL26208
Series:: GSE221679

Download data: BW

Sample

Accession:: GSM7310399

ID:: 307310399

SRA Run Selector

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