GSE205778[Accession] - GEO DataSets - NCBI

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Select item 2002057781.

Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos [cHi-C]

(Submitter supplied) During development, Hox genes are activated in a time sequence following their relative positions on their clusters, leading to the proper identities of structures along the rostral to caudal axis. To understand the mechanism operating this Hox timer, we used ES-cells derived stembryos and show that the core of the process involves the start of transcription at the anterior part of the cluster, following Wnt signaling, and a concomitant loading of cohesin complexes enriched on the transcribed DNA segments, i.e., with an asymmetric distribution in favor of the anterior part the gene cluster. more...

Organism:: Mus musculus

Type:: Other

Platform:: GPL19057
20 Samples

Download data: COOL, TXT

Series

Accession:: GSE205778

ID:: 200205778

PubMed Full text in PMC Similar studies

Select item 1000190572.

Illumina NextSeq 500 (Mus musculus)

Organism:: Mus musculus

10369 Series
297613 Samples

Platform

Accession:: GPL19057

ID:: 100019057

Select item 3070353773.

CHi-C of wt stembryos at 144h, rep3

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM7035377

ID:: 307035377

SRA Run Selector

Select item 3070353764.

CHi-C of wt stembryos at 144h, rep2

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM7035376

ID:: 307035376

SRA Run Selector

Select item 3070353755.

CHi-C of wt stembryos at 96h, rep3

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM7035375

ID:: 307035375

SRA Run Selector

Select item 3070353746.

CHi-C of wt stembryos at 96h, rep2

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM7035374

ID:: 307035374

SRA Run Selector

Select item 3070353737.

CHi-C of wt stembryos at 48h, rep3

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM7035373

ID:: 307035373

SRA Run Selector

Select item 3070353728.

CHi-C of wt stembryos at 48h, rep2

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM7035372

ID:: 307035372

SRA Run Selector

Select item 3062262299.

CHi-C of wt stembryos at 168h

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM6226229

ID:: 306226229

SRA Run Selector

Select item 30622622810.

CHi-C of wt stembryos at 144h

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM6226228

ID:: 306226228

SRA Run Selector

Select item 30622622711.

CHi-C of wt stembryos at 120h

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM6226227

ID:: 306226227

SRA Run Selector

Select item 30622622612.

CHi-C of wt stembryos at 96h

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM6226226

ID:: 306226226

SRA Run Selector

Select item 30622622513.

CHi-C of wt stembryos at 72h

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM6226225

ID:: 306226225

SRA Run Selector

Select item 30622622414.

CHi-C of wt stembryos at 48h

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM6226224

ID:: 306226224

SRA Run Selector

Select item 30622622315.

CHi-C of Del(sub-TAD1) stembryos at 96h

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM6226223

ID:: 306226223

SRA Run Selector

Select item 30622622216.

CHi-C of Del(d1-d4) stembryos at 96h

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM6226222

ID:: 306226222

SRA Run Selector

Select item 30622622117.

CHi-C of Del(CBS1-5) stembryos at 168h

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM6226221

ID:: 306226221

SRA Run Selector

Select item 30622622018.

CHi-C of Del(CBS1-5) stembryos at 144h

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM6226220

ID:: 306226220

SRA Run Selector

Select item 30622621919.

CHi-C of Del(CBS1-5) stembryos at 120h

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM6226219

ID:: 306226219

SRA Run Selector

Select item 30622621820.

CHi-C of Del(CBS1-5) stembryos at 96h

Organism:: Mus musculus

Source name:: stembryo

Platform:: GPL19057
Series:: GSE205778 GSE205783

Download data: COOL, TXT

Sample

Accession:: GSM6226218

ID:: 306226218

SRA Run Selector

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