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Items: 10

1.

Epithelial zonation along the mammalian small intestine defines five discrete metabolic domains [Mouse_bulkRNA-seq]

(Submitter supplied) Longitudinal zonation of epithelial cells across the mammalian small intestine defines five domains of nutrient absorption.  We then performed gene expression profiling analysis using data obtained from RNA-seq of 4 different cells at two time points.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24247
8 Samples
Download data: TSV
Series
Accession:
GSE201858
ID:
200201858
2.

Illumina NovaSeq 6000 (Mus musculus)

Platform
Accession:
GPL24247
ID:
100024247
3.

Cdx1 mutant organoid line 1: transduced with Ppard-targetting dual guide RNAs, treated with 4-hydroxytamoxifen

Organism:
Mus musculus
Source name:
Primary murine organoids from distal small intestine
Platform:
GPL24247
Series:
GSE201858 GSE201859
Download data: TSV
Sample
Accession:
GSM6077242
ID:
306077242
4.

Dual guide RNA targeting Cdx1 infected, untreated, control organoids

Organism:
Mus musculus
Source name:
Primary murine organoids from distal small intestine
Platform:
GPL24247
Series:
GSE201858 GSE201859
Download data: TSV
Sample
Accession:
GSM6077241
ID:
306077241
5.

Ppard mutant organoid line 1: transduced with Ppard-targetting dual guide RNAs, treated with 4-hydroxytamoxifen, 2

Organism:
Mus musculus
Source name:
Primary murine organoids from distal small intestine
Platform:
GPL24247
Series:
GSE201858 GSE201859
Download data: TSV
Sample
Accession:
GSM6077240
ID:
306077240
6.

Ppard mutant organoid line 1: transduced with Ppard-targetting dual guide RNAs, treated with 4-hydroxytamoxifen, 1

Organism:
Mus musculus
Source name:
Primary murine organoids from distal small intestine
Platform:
GPL24247
Series:
GSE201858 GSE201859
Download data: TSV
Sample
Accession:
GSM6077239
ID:
306077239
7.

Dual guide RNA targeting Ppard infected, untreated, control organoids, 2

Organism:
Mus musculus
Source name:
Primary murine organoids from distal small intestine
Platform:
GPL24247
Series:
GSE201858 GSE201859
Download data: TSV
Sample
Accession:
GSM6077238
ID:
306077238
8.

Dual guide RNA targeting Ppard infected, untreated, control organoids, 1

Organism:
Mus musculus
Source name:
Primary murine organoids from distal small intestine
Platform:
GPL24247
Series:
GSE201858 GSE201859
Download data: TSV
Sample
Accession:
GSM6077237
ID:
306077237
9.

Uninfected, 4-hydroxytamoxifen treated, control organoids

Organism:
Mus musculus
Source name:
Primary murine organoids from distal small intestine
Platform:
GPL24247
Series:
GSE201858 GSE201859
Download data: TSV
Sample
Accession:
GSM6077236
ID:
306077236
10.

Uninfected, untreated, control organoids

Organism:
Mus musculus
Source name:
Primary murine organoids from distal small intestine
Platform:
GPL24247
Series:
GSE201858 GSE201859
Download data: TSV
Sample
Accession:
GSM6077235
ID:
306077235
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