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Items: 6

1.

Perturb-map coupled with spatial transcriptomics identifies mutation associated gene signatures in a mouse model of lung adenocarcinoma

(Submitter supplied) The cellular architecture of a tumor has a major impact on cancer outcome, and thus there is interest in identifying genes controlling the tumor microenvironment (TME). While CRISPR screens are helping uncover genes regulating many cell-intrinsic processes, existing approaches are suboptimal for identifying gene functions operating extracellularly or within a tissue context. To address this, we developed an approach for spatial functional genomics called Perturb-map, which utilizes protein barcodes (Pro-Code) to enable spatial detection of barcoded cells within tissue. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Other
Platform:
GPL24247
4 Samples
Download data: CSV, H5, JPG, JSON, PNG, XLSX
Series
Accession:
GSE193460
ID:
200193460
2.

Illumina NovaSeq 6000 (Mus musculus)

Platform
Accession:
GPL24247
ID:
100024247
3.

KP day 28 mouse 7.2

Organism:
Mus musculus
Source name:
lung
Platform:
GPL24247
Series:
GSE193460
Download data: CSV, H5, JPG, JSON, PNG
Sample
Accession:
GSM5808057
ID:
305808057
4.

KP day 28 mouse 5.1

Organism:
Mus musculus
Source name:
lung
Platform:
GPL24247
Series:
GSE193460
Download data: CSV, H5, JPG, JSON, PNG
Sample
Accession:
GSM5808056
ID:
305808056
5.

KP day 28 mouse 4.3

Organism:
Mus musculus
Source name:
lung
Platform:
GPL24247
Series:
GSE193460
Download data: CSV, H5, JPG, JSON, PNG
Sample
Accession:
GSM5808055
ID:
305808055
6.

KP day28 mouse 4.1

Organism:
Mus musculus
Source name:
lung
Platform:
GPL24247
Series:
GSE193460
Download data: CSV, H5, JPG, JSON, PNG
Sample
Accession:
GSM5808054
ID:
305808054
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Supplemental Content

db=gds|term=GSE193460[Accession]|query=1|qty=2|blobid=MCID_672b8210b70df60c4d41f650|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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