U.S. flag

An official website of the United States government

Format
Items per page
Sort by

Send to:

Choose Destination

Search results

Items: 1 to 20 of 31

1.

Arthritogenic SKG T cells have a transcriptional program of activation and a repertoire pruned by superantigen

(Submitter supplied) Purpose: The goals of this study were to study the transcriptome and TCR repertoire of naive CD4 T cells before the induction of arthritis in the SKG and wild-type (WT) mouse with eGFP-Nur77 as a reporter of antigen stimulation (SKGNur and WTNur). Methods: Bulk RNA sequencing was used to generate the mRNA profiles for the top 10% and bottom 10% of GFP expressing cells from three SKGNur and three WTNur BALB/c mice resulting in 12 samples overall (3 WT Low, 3 WT High, 3 SKG Low, 3 SKG High) using the Truseq Stranded mRNA kit followed by sequencing on a HiSeq 2500 sequencer. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Other
Platforms:
GPL17021 GPL24247
28 Samples
Download data: CSV, H5AD
Series
Accession:
GSE185577
ID:
200185577
2.

Illumina NovaSeq 6000 (Mus musculus)

Platform
Accession:
GPL24247
ID:
100024247
3.

Illumina HiSeq 2500 (Mus musculus)

Platform
Accession:
GPL17021
ID:
100017021
4.

tcr_Sample 4b [WT Low TCR Rep 2]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data: CSV
Sample
Accession:
GSM5618842
ID:
305618842
5.

tcr_Sample 4a [WT High TCR Rep 2]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data: CSV
Sample
Accession:
GSM5618841
ID:
305618841
6.

tcr_Sample 3b [SKG Low TCR Rep 2]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data: CSV
Sample
Accession:
GSM5618840
ID:
305618840
7.

tcr_Sample 3a [SKG High TCR Rep 2]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data: CSV
Sample
Accession:
GSM5618839
ID:
305618839
8.

tcr_Sample 2b [WT Low TCR Rep 1]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data: CSV
Sample
Accession:
GSM5618838
ID:
305618838
9.

tcr_Sample 2a [WT High TCR Rep 1]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data: CSV
Sample
Accession:
GSM5618837
ID:
305618837
10.

tcr_Sample 1b [SKG Low TCR Rep 1]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data: CSV
Sample
Accession:
GSM5618836
ID:
305618836
11.

tcr_Sample 1a [SKG High TCR Rep 1]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data: CSV
Sample
Accession:
GSM5618835
ID:
305618835
12.

sc_Sample 4b [WT Low single cell Rep 2]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data
Sample
Accession:
GSM5618834
ID:
305618834
13.

sc_Sample 4a [WT High single cell Rep 2]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data
Sample
Accession:
GSM5618833
ID:
305618833
14.

sc_Sample 3b [SKG Low single cell Rep 2]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data
Sample
Accession:
GSM5618832
ID:
305618832
15.

sc_Sample 3a [SKG High single cell Rep 2]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data
Sample
Accession:
GSM5618831
ID:
305618831
16.

sc_Sample 2b [WT Low single cell Rep 1]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data
Sample
Accession:
GSM5618830
ID:
305618830
17.

sc_Sample 2a [WT High single cell Rep 1]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data
Sample
Accession:
GSM5618829
ID:
305618829
18.

sc_Sample 1b [SKG Low single cell Rep 1]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data
Sample
Accession:
GSM5618828
ID:
305618828
19.

sc_Sample 1a [SKG High single cell Rep 1]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL24247
Series:
GSE185577
Download data
Sample
Accession:
GSM5618827
ID:
305618827
20.

Sample 6b [WT High Rep 3]

Organism:
Mus musculus
Source name:
naive CD4 T cells
Platform:
GPL17021
Series:
GSE185577
Download data
Sample
Accession:
GSM5618826
ID:
305618826
Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

db=gds|term=GSE185577[Accession]|query=1|qty=2|blobid=MCID_669f44c656cb0a044e036441|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
   Taxonomic Groups  [List]
Tree placeholder
    Top Organisms  [Tree]

Find related data

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center