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Items: 16

1.

DNA Binding Specificities of Fkh1, Fkh2, Hcm1, and Fhl1 Revealed by SELEX-seq

(Submitter supplied) Quantifying the preferences of DNA binding proteins is an essential step in determining how transcription factors (TFs) interact with their targets in the genome. High-throughput in vitro binding assays have been used to identify the inherent DNA preferences of TFs in a controlled environment isolated from confounding factors such as genome accessibility, DNA methylation, and TF binding cooperativity. more...
Organism:
synthetic construct
Type:
Other
Platforms:
GPL19604 GPL19424
13 Samples
Download data: TAR
Series
Accession:
GSE178811
ID:
200178811
2.

Illumina HiSeq 2500 (synthetic construct)

Organism:
synthetic construct
54 Series
5348 Samples
Download data
Platform
Accession:
GPL19604
ID:
100019604
3.

Illumina NextSeq 500 (synthetic construct)

Organism:
synthetic construct
100 Series
973 Samples
Download data
Platform
Accession:
GPL19424
ID:
100019424
4.

Fhl1_R2

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM6127498
ID:
306127498
5.

Fhl1_R1

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM6127497
ID:
306127497
6.

Hcm1_R2

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM6127496
ID:
306127496
7.

Hcm1_R1

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM6127495
ID:
306127495
8.

Hcm1_Fhl1_R0

Organism:
synthetic construct
Source name:
in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data
Sample
Accession:
GSM6127494
ID:
306127494
9.

Fkh1_R2_test

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM5398238
ID:
305398238
10.

Fkh1_R1_test

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM5398237
ID:
305398237
11.

R0_test

Organism:
synthetic construct
Source name:
in vitro library
Platform:
GPL19604
Series:
GSE178811
Download data
Sample
Accession:
GSM5398236
ID:
305398236
12.

Fkh2_R2

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19424
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM5398243
ID:
305398243
13.

Fkh2_R1

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19424
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM5398242
ID:
305398242
14.

Fkh1_R2

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19424
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM5398241
ID:
305398241
15.

Fkh1_R1

Organism:
synthetic construct
Source name:
bound fragments from in vitro library
Platform:
GPL19424
Series:
GSE178811
Download data: TAR
Sample
Accession:
GSM5398240
ID:
305398240
16.

Fkh1_Fkh2_R0

Organism:
synthetic construct
Source name:
in vitro library
Platform:
GPL19424
Series:
GSE178811
Download data
Sample
Accession:
GSM5398239
ID:
305398239
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Supplemental Content

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