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Items: 18

1.

Innate, translation-dependent silencing of an invasive transposon in Arabidopsis

(Submitter supplied) Co-evolution between hosts' and parasites' genomes shapes diverse pathways of acquired immunity based on silencing small (s)RNAs. In plants, sRNAs cause heterochromatinization, sequence-degeneration and, ultimately, loss-of-autonomy of most transposable elements (TEs). Recognition of newly-invasive plant TEs, by contrast, involves an innate antiviral-like silencing response. To investigate this response's activation, we studied the single-copy element EVADÉ (EVD), one of few representatives of the large Ty1/Copia family able to proliferate in Arabidopsis when epigenetically-reactivated. more...
Organism:
Arabidopsis thaliana
Type:
Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing
Platform:
GPL17639
16 Samples
Download data: BED, CSV
Series
Accession:
GSE167484
ID:
200167484
2.

Illumina HiSeq 2500 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
821 Series
14604 Samples
Download data
Platform
Accession:
GPL17639
ID:
100017639
3.

ddm1_total_NanoPare_2

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5213541
ID:
305213541
4.

ddm1_total_NanoPare_1

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5213540
ID:
305213540
5.

col0_total_NanoPare_2

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5213539
ID:
305213539
6.

col0_total_NanoPare_1

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5213538
ID:
305213538
7.

ddm1_total_SMARTseq_2

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5213537
ID:
305213537
8.

ddm1_total_SMARTseq_1

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5213536
ID:
305213536
9.

col0_total_SMARTseq_2

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5213535
ID:
305213535
10.

col0_total_SMARTseq_1

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5213534
ID:
305213534
11.

35S.GFP-EVD-GUS.rdr6 sRNA-seq

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5106029
ID:
305106029
12.

35S.GFP-EVD-GUS.Col-0 sRNA-seq

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5106028
ID:
305106028
13.

35S.EVD.rdr6 sRNA-seq

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5106027
ID:
305106027
14.

35S.EVD.Col-0 sRNA-seq

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5106026
ID:
305106026
15.

35S.GFP-EVD-GUS.rdr6 RIBO-seq

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5106025
ID:
305106025
16.

35S.GFP-EVD-GUS.Col-0 RIBO-seq

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5106024
ID:
305106024
17.

35S.EVD.rdr6 RIBO-seq

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5106023
ID:
305106023
18.

35S.EVD.Col-0 RIBO-seq

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL17639
Series:
GSE167484
Download data
Sample
Accession:
GSM5106022
ID:
305106022
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Supplemental Content

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