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Items: 5

1.

Genome-wide binding profile of Smad3 and Smad7 in mouse Ch12 cell line (RNA-Seq)

(Submitter supplied) Mammalian genome encodes approximately 1,700 transcription factors (TFs), 1,300 out of which have sequence specific binding motifs. Transcription in mammalian cells is regulated by the recruitment of TFs to specific cis-regulatory elements. In spite of consistent efforts on the function of individual TF, the question still remains how TFs bind to DNA and form enhancer. Here, we try to solve this problem by investigating the relationship between TF binding pattern and chromatin accessibility (ATAC-Seq). more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24247
3 Samples
Download data: BW, TAB
Series
Accession:
GSE165331
ID:
200165331
2.

Illumina NovaSeq 6000 (Mus musculus)

Platform
Accession:
GPL24247
ID:
100024247
3.

Ch12 treated with TGFb for 24 hours

Organism:
Mus musculus
Source name:
Ch12 cell line
Platform:
GPL24247
Series:
GSE165331
Download data: BW, TAB
Sample
Accession:
GSM5031671
ID:
305031671
4.

Ch12 treated with TGFb for 6 hours

Organism:
Mus musculus
Source name:
Ch12 cell line
Platform:
GPL24247
Series:
GSE165331
Download data: BW, TAB
Sample
Accession:
GSM5031670
ID:
305031670
5.

Ch12 control

Organism:
Mus musculus
Source name:
Ch12 cell line
Platform:
GPL24247
Series:
GSE165331
Download data: BW, TAB
Sample
Accession:
GSM5031669
ID:
305031669
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Supplemental Content

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