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Items: 1 to 20 of 58

1.

The SAM domain-containing protein 1 (SAMD1) acts as a repressive chromatin regulator at unmethylated CpG islands

(Submitter supplied) CpG-islands (CGIs) are key regulatory DNA elements at most promoters, but how they influence the chromatin status and transcription remains elusive. Here we identify and characterize SAMD1 (SAM domain-containing protein 1) as an unmethylated CGI-binding protein. SAMD1 possesses an atypical winged-helix domain that directly recognizes unmethylated CpG-containing DNA via simultaneous interactions with both the major and the minor groove. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL21626 GPL18480
55 Samples
Download data: BW, TXT
Series
Accession:
GSE144396
ID:
200144396
2.

NextSeq 550 (Mus musculus)

Platform
Accession:
GPL21626
ID:
100021626
3.

Illumina HiSeq 1500 (Mus musculus)

Platform
Accession:
GPL18480
ID:
100018480
4.

RNA-Seq L3MBTL3KO repl3

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773853
ID:
304773853
5.

RNA-Seq L3MBTL3KO repl2

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773852
ID:
304773852
6.

RNA-Seq L3MBTL3KO repl1

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773851
ID:
304773851
7.

RNA-Seq KDM1AKO repl3

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773850
ID:
304773850
8.

RNA-Seq KDM1AKO repl2

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773849
ID:
304773849
9.

RNA-Seq KDM1AKO repl1

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773848
ID:
304773848
10.

RNA-Seq WT2 repl3

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773847
ID:
304773847
11.

RNA-Seq WT2 repl2

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773846
ID:
304773846
12.

RNA-Seq WT2 repl1

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773845
ID:
304773845
13.

RNA-Seq Diff-d7 SAMD1KO repl3

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773844
ID:
304773844
14.

RNA-Seq Diff-d7 SAMD1KO repl2

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773843
ID:
304773843
15.

RNA-Seq Diff-d7 SAMD1KO repl1

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773842
ID:
304773842
16.

RNA-Seq Diff-d7 WT repl3

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773841
ID:
304773841
17.

RNA-Seq Diff-d7 WT repl2

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773840
ID:
304773840
18.

RNA-Seq Diff-d7 WT repl1

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773839
ID:
304773839
19.

RNA-Seq Diff-d0 SAMD1KO repl3

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773838
ID:
304773838
20.

RNA-Seq Diff-d0 SAMD1KO repl2

Organism:
Mus musculus
Source name:
E14TG2a
Platform:
GPL21626
Series:
GSE144396
Download data
Sample
Accession:
GSM4773837
ID:
304773837
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Supplemental Content

db=gds|term=GSE144396[Accession]|query=1|qty=2|blobid=MCID_6655e8cbe795547e5fc72277|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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