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Items: 1 to 20 of 42

1.

Transcription regulation of SNCA by dystonia type 6 gene product THAP1

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Rattus norvegicus; Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing
4 related Platforms
37 Samples
Download data: BED, BEDGRAPH, BIGWIG, TSV
Series
Accession:
GSE141278
ID:
200141278
2.

Illumina NovaSeq 6000 (Rattus norvegicus)

Organism:
Rattus norvegicus
469 Series
10814 Samples
Download data
Platform
Accession:
GPL25947
ID:
100025947
3.

Illumina NovaSeq 6000 (Homo sapiens)

Platform
Accession:
GPL24676
ID:
100024676
4.

Illumina NextSeq 500 (Homo sapiens)

Platform
Accession:
GPL18573
ID:
100018573
5.

Illumina HiSeq 2500 (Homo sapiens)

Platform
Accession:
GPL16791
ID:
100016791
6.

4C-seq THAP1 KD repeat 2

Organism:
Homo sapiens
Source name:
SH-SY5Y cells
Platform:
GPL18573
Series:
GSE141277 GSE141278
Download data: BEDGRAPH
Sample
Accession:
GSM4200335
ID:
304200335
7.

4C-seq THAP1 KD repeat 1

Organism:
Homo sapiens
Source name:
SH-SY5Y cells
Platform:
GPL18573
Series:
GSE141277 GSE141278
Download data: BEDGRAPH
Sample
Accession:
GSM4200334
ID:
304200334
8.

4C-seq CTCF KO repeat 2

Organism:
Homo sapiens
Source name:
SH-SY5Y cells
Platform:
GPL18573
Series:
GSE141277 GSE141278
Download data: BEDGRAPH
Sample
Accession:
GSM4200333
ID:
304200333
9.

4C-seq CTCF KO repeat 1

Organism:
Homo sapiens
Source name:
SH-SY5Y cells
Platform:
GPL18573
Series:
GSE141277 GSE141278
Download data: BEDGRAPH
Sample
Accession:
GSM4200332
ID:
304200332
10.

4C-seq wild-type repeat 2

Organism:
Homo sapiens
Source name:
SH-SY5Y cells
Platform:
GPL18573
Series:
GSE141277 GSE141278
Download data: BEDGRAPH
Sample
Accession:
GSM4200331
ID:
304200331
11.

4C-seq wild-type repeat 1

Organism:
Homo sapiens
Source name:
SH-SY5Y cells
Platform:
GPL18573
Series:
GSE141277 GSE141278
Download data: BEDGRAPH
Sample
Accession:
GSM4200330
ID:
304200330
12.

THAP1 KD Mouse IgG control

Organism:
Homo sapiens
Source name:
SH-SY5Y cells
Platform:
GPL18573
Series:
GSE141244 GSE141278
Download data: BIGWIG
Sample
Accession:
GSM4199236
ID:
304199236
13.

THAP1 KD Rabbit IgG control

Organism:
Homo sapiens
Source name:
SH-SY5Y cells
Platform:
GPL18573
Series:
GSE141244 GSE141278
Download data: BIGWIG
Sample
Accession:
GSM4199235
ID:
304199235
14.

Wild-type Rabbit IgG control

Organism:
Homo sapiens
Source name:
SH-SY5Y cells
Platform:
GPL18573
Series:
GSE141244 GSE141278
Download data: BIGWIG
Sample
Accession:
GSM4199234
ID:
304199234
15.

THAP1 KD H3K27ac ChIP-seq

Organism:
Homo sapiens
Source name:
SH-SY5Y cells
Platform:
GPL18573
Series:
GSE141244 GSE141278
Download data: BED, BIGWIG
Sample
Accession:
GSM4199233
ID:
304199233
16.

Wild-type H3K27ac ChIP-seq

Organism:
Homo sapiens
Source name:
SH-SY5Y cells
Platform:
GPL18573
Series:
GSE141244 GSE141278
Download data: BED, BIGWIG
Sample
Accession:
GSM4199232
ID:
304199232
17.

THAP1 KD CEBPD ChIP-seq

Organism:
Homo sapiens
Source name:
SH-SY5Y cells
Platform:
GPL18573
Series:
GSE141244 GSE141278
Download data: BED, BIGWIG
Sample
Accession:
GSM4199230
ID:
304199230
18.

anti-flag ChIP-seq empty vec

Organism:
Homo sapiens
Source name:
SH-SY5Y cells
Platform:
GPL18573
Series:
GSE141244 GSE141278
Download data: BIGWIG
Sample
Accession:
GSM4199228
ID:
304199228
19.

anti-flag ChIP-seq THAP1

Organism:
Homo sapiens
Source name:
SH-SY5Y cells
Platform:
GPL18573
Series:
GSE141244 GSE141278
Download data: BED, BIGWIG
Sample
Accession:
GSM4199227
ID:
304199227
20.

THAP1 KD GATA2 ChIP-seq

Organism:
Homo sapiens
Source name:
SH-SY5Y cells
Platform:
GPL24676
Series:
GSE141244 GSE141278
Download data: BED, BIGWIG
Sample
Accession:
GSM4199231
ID:
304199231
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Supplemental Content

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