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Items: 20

1.

The structural basis for cohesin/CTCF anchored loops

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other
Platforms:
GPL16791 GPL21697 GPL24676
16 Samples
Download data: NARROWPEAK, TXT
Series
Accession:
GSE126637
ID:
200126637
2.

Illumina NovaSeq 6000 (Homo sapiens)

Platform
Accession:
GPL24676
ID:
100024676
3.

NextSeq 550 (Homo sapiens)

Platform
Accession:
GPL21697
ID:
100021697
4.

Illumina HiSeq 2500 (Homo sapiens)

Platform
Accession:
GPL16791
ID:
100016791
5.

CTCF ChIP - CTCF Y226A, F228A

Organism:
Homo sapiens
Source name:
CTCF Y226A, F228A
Platform:
GPL16791
Series:
GSE126634 GSE126637
Download data: NARROWPEAK
Sample
Accession:
GSM4052953
ID:
304052953
6.

CTCF ChIP - WT

Organism:
Homo sapiens
Source name:
WT
Platform:
GPL16791
Series:
GSE126634 GSE126637
Download data: NARROWPEAK
Sample
Accession:
GSM4052952
ID:
304052952
7.

SCC1 ChIP - CTCF Y226A, F228A

Organism:
Homo sapiens
Source name:
CTCF Y226A, F228A
Platform:
GPL16791
Series:
GSE126634 GSE126637
Download data: NARROWPEAK
Sample
Accession:
GSM4052951
ID:
304052951
8.

SCC1 ChIP - WT

Organism:
Homo sapiens
Source name:
WT
Platform:
GPL16791
Series:
GSE126634 GSE126637
Download data: NARROWPEAK
Sample
Accession:
GSM4052950
ID:
304052950
9.

RNA-seq_CTCF Y226A, F228A_rep3

Organism:
Homo sapiens
Source name:
CTCF Y226A, F228A
Platform:
GPL16791
Series:
GSE126635 GSE126637
Download data
Sample
Accession:
GSM3610144
ID:
303610144
10.

RNA-seq_CTCF Y226A, F228A_rep2

Organism:
Homo sapiens
Source name:
CTCF Y226A, F228A
Platform:
GPL16791
Series:
GSE126635 GSE126637
Download data
Sample
Accession:
GSM3610143
ID:
303610143
11.

RNA-seq_CTCF Y226A, F228A_rep1

Organism:
Homo sapiens
Source name:
CTCF Y226A, F228A
Platform:
GPL16791
Series:
GSE126635 GSE126637
Download data
Sample
Accession:
GSM3610142
ID:
303610142
12.

RNA-seq_WT_rep3

Organism:
Homo sapiens
Source name:
WT
Platform:
GPL16791
Series:
GSE126635 GSE126637
Download data
Sample
Accession:
GSM3610141
ID:
303610141
13.

RNA-seq_WT_rep2

Organism:
Homo sapiens
Source name:
WT
Platform:
GPL16791
Series:
GSE126635 GSE126637
Download data
Sample
Accession:
GSM3610140
ID:
303610140
14.

RNA-seq_WT_rep1

Organism:
Homo sapiens
Source name:
WT
Platform:
GPL16791
Series:
GSE126635 GSE126637
Download data
Sample
Accession:
GSM3610139
ID:
303610139
15.

Hi-C_CTCF Y226A, F228A 2.1

Organism:
Homo sapiens
Source name:
HAP1
Platform:
GPL21697
Series:
GSE126636 GSE126637
Download data
Sample
Accession:
GSM4052983
ID:
304052983
16.

Hi-C_WT 2.1

Organism:
Homo sapiens
Source name:
HAP1
Platform:
GPL21697
Series:
GSE126636 GSE126637
Download data
Sample
Accession:
GSM4052982
ID:
304052982
17.

Hi-C_CTCF Y226A, F228A 1

Organism:
Homo sapiens
Source name:
HAP1
Platform:
GPL21697
Series:
GSE126636 GSE126637
Download data
Sample
Accession:
GSM4052981
ID:
304052981
18.

Hi-C_WT 1

Organism:
Homo sapiens
Source name:
HAP1
Platform:
GPL21697
Series:
GSE126636 GSE126637
Download data
Sample
Accession:
GSM4052980
ID:
304052980
19.

Hi-C_CTCF Y226A, F228A 2.2

Organism:
Homo sapiens
Source name:
HAP1
Platform:
GPL24676
Series:
GSE126636 GSE126637
Download data
Sample
Accession:
GSM4052985
ID:
304052985
20.

Hi-C_WT 2.2

Organism:
Homo sapiens
Source name:
HAP1
Platform:
GPL24676
Series:
GSE126636 GSE126637
Download data
Sample
Accession:
GSM4052984
ID:
304052984
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Supplemental Content

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