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Items: 18

1.

Parkinson-associated SNCA enhancer variants revealed by open chromatin in mouse dopamine neurons

(Submitter supplied) The progressive loss of midbrain (MB) dopaminergic (DA) neurons defines the motor features of Parkinson disease (PD) and modulation of risk by common variation in PD has been well established through GWAS. Anticipating that a fraction of PD-associated genetic variation mediates their effects within this neuronal population, we acquired open chromatin signatures of purified embryonic mouse MB DA neurons. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platforms:
GPL16417 GPL17021
15 Samples
Download data: TXT
Series
Accession:
GSE122450
ID:
200122450
2.

Illumina HiSeq 2500 (Mus musculus)

Platform
Accession:
GPL17021
ID:
100017021
3.

Illumina MiSeq (Mus musculus)

Platform
Accession:
GPL16417
ID:
100016417
4.

FB_RNA_rep4

Organism:
Mus musculus
Source name:
E15.5 forebrain dopaminergic neurons
Platform:
GPL17021
Series:
GSE122450
Download data
Sample
Accession:
GSM3466729
ID:
303466729
5.

FB_RNA_rep3

Organism:
Mus musculus
Source name:
E15.5 forebrain dopaminergic neurons
Platform:
GPL17021
Series:
GSE122450
Download data
Sample
Accession:
GSM3466728
ID:
303466728
6.

FB_RNA_rep2

Organism:
Mus musculus
Source name:
E15.5 forebrain dopaminergic neurons
Platform:
GPL17021
Series:
GSE122450
Download data
Sample
Accession:
GSM3466727
ID:
303466727
7.

FB_RNA_rep1

Organism:
Mus musculus
Source name:
E15.5 forebrain dopaminergic neurons
Platform:
GPL17021
Series:
GSE122450
Download data
Sample
Accession:
GSM3466726
ID:
303466726
8.

MB_RNA_rep4

Organism:
Mus musculus
Source name:
E15.5 midbrain dopaminergic neurons
Platform:
GPL17021
Series:
GSE122450
Download data
Sample
Accession:
GSM3466725
ID:
303466725
9.

MB_RNA_rep3

Organism:
Mus musculus
Source name:
E15.5 midbrain dopaminergic neurons
Platform:
GPL17021
Series:
GSE122450
Download data
Sample
Accession:
GSM3466724
ID:
303466724
10.

MB_RNA_rep2

Organism:
Mus musculus
Source name:
E15.5 midbrain dopaminergic neurons
Platform:
GPL17021
Series:
GSE122450
Download data
Sample
Accession:
GSM3466723
ID:
303466723
11.

MB_RNA_rep1

Organism:
Mus musculus
Source name:
E15.5 midbrain dopaminergic neurons
Platform:
GPL17021
Series:
GSE122450
Download data
Sample
Accession:
GSM3466722
ID:
303466722
12.

MB_ATAC_rep2 (DeepSeq)

Organism:
Mus musculus
Source name:
E15.5 midbrain dopaminergic neurons
Platform:
GPL17021
Series:
GSE122450
Download data: TXT
Sample
Accession:
GSM3466717
ID:
303466717
13.

FB_ATAC_rep3

Organism:
Mus musculus
Source name:
E15.5 forebrain dopaminergic neurons
Platform:
GPL16417
Series:
GSE122450
Download data: TXT
Sample
Accession:
GSM3466721
ID:
303466721
14.

FB_ATAC_rep2

Organism:
Mus musculus
Source name:
E15.5 forebrain dopaminergic neurons
Platform:
GPL16417
Series:
GSE122450
Download data: TXT
Sample
Accession:
GSM3466720
ID:
303466720
15.

FB_ATAC_rep1

Organism:
Mus musculus
Source name:
E15.5 forebrain dopaminergic neurons
Platform:
GPL16417
Series:
GSE122450
Download data: TXT
Sample
Accession:
GSM3466719
ID:
303466719
16.

MB_ATAC_rep3

Organism:
Mus musculus
Source name:
E15.5 midbrain dopaminergic neurons
Platform:
GPL16417
Series:
GSE122450
Download data: TXT
Sample
Accession:
GSM3466718
ID:
303466718
17.

MB_ATAC_rep2

Organism:
Mus musculus
Source name:
E15.5 midbrain dopaminergic neurons
Platform:
GPL16417
Series:
GSE122450
Download data: TXT
Sample
Accession:
GSM3466716
ID:
303466716
18.

MB_ATAC_rep1

Organism:
Mus musculus
Source name:
E15.5 midbrain dopaminergic neurons
Platform:
GPL16417
Series:
GSE122450
Download data: TXT
Sample
Accession:
GSM3466715
ID:
303466715
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Supplemental Content

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