U.S. flag

An official website of the United States government

Format
Items per page
Sort by

Send to:

Choose Destination

Search results

Items: 19

1.

Recovery and analysis of transcriptome subsets from pooled single-cell RNA-seq libraries

(Submitter supplied) Single-cell RNA sequencing (scRNA-seq) methods generate sparse gene expression profiles for thousands of single cells in a single experiment. The information in these profiles is sufficient to classify cell types by distinct expression patterns but the high complexity of scRNA-seq libraries prevents full characterization of transcriptomes from individual cells. To generate more focused gene expression information from scRNA-seq libraries, we developed a strategy to physically recover the DNA molecules comprising transcriptome subsets, enabling deeper interrogation of the isolated molecules by another round of DNA sequencing. more...
Organism:
Homo sapiens; Mus musculus
Type:
Expression profiling by high throughput sequencing
5 related Platforms
13 Samples
Download data: JSON, TSV, TXT
Series
Accession:
GSE119428
ID:
200119428
2.

Illumina NovaSeq 6000 (Homo sapiens; Mus musculus)

Organism:
Homo sapiens; Mus musculus
79 Series
479 Samples
Download data
Platform
Accession:
GPL25526
ID:
100025526
3.

Illumina HiSeq 4000 (Homo sapiens; Mus musculus)

Organism:
Homo sapiens; Mus musculus
25 Series
200 Samples
Download data
Platform
Accession:
GPL25431
ID:
100025431
4.

Illumina NovaSeq 6000 (Homo sapiens)

Platform
Accession:
GPL24676
ID:
100024676
5.

Illumina HiSeq 4000 (Homo sapiens)

Platform
Accession:
GPL20301
ID:
100020301
6.

Illumina MiSeq (Homo sapiens)

Platform
Accession:
GPL15520
ID:
100015520
7.

pcr_wafergen_expt_original

Organism:
Homo sapiens
Source name:
Human Breast Cancer Xenograft
Platform:
GPL20301
Series:
GSE119428
Download data: TSV
Sample
Accession:
GSM3374607
ID:
303374607
8.

lna_cell_jurkat_tcr_original

Organism:
Homo sapiens
Source name:
Jurkat cell line
Platform:
GPL15520
Series:
GSE119428
Download data: JSON
Sample
Accession:
GSM3374618
ID:
303374618
9.

lna_gene_jurkat_cd3d_original

Organism:
Homo sapiens
Source name:
Jurkat cell line
Platform:
GPL15520
Series:
GSE119428
Download data: TSV
Sample
Accession:
GSM3374615
ID:
303374615
10.

lna_cell_mousehuman_original

Organism:
Homo sapiens; Mus musculus
Source name:
1:1 mix of NIH3T3 cell line and 293T cell line
Platform:
GPL25431
Series:
GSE119428
Download data: TSV
Sample
Accession:
GSM3374611
ID:
303374611
11.

pcr_wafergen_expt_phosphorothioate

Organism:
Homo sapiens
Source name:
Human Breast Cancer Xenograft
Platform:
GPL15520
Series:
GSE119428
Download data: TSV
Sample
Accession:
GSM3374610
ID:
303374610
12.

pcr_wafergen_expt_biotinylated

Organism:
Homo sapiens
Source name:
Human Breast Cancer Xenograft
Platform:
GPL15520
Series:
GSE119428
Download data: TSV
Sample
Accession:
GSM3374609
ID:
303374609
13.

pcr_wafergen_expt_standard

Organism:
Homo sapiens
Source name:
Human Breast Cancer Xenograft
Platform:
GPL15520
Series:
GSE119428
Download data: TSV
Sample
Accession:
GSM3374608
ID:
303374608
14.

lna_cell_jurkat_tcr_resampled

Organism:
Homo sapiens
Source name:
Jurkat cell line
Platform:
GPL24676
Series:
GSE119428
Download data: JSON
Sample
Accession:
GSM3374619
ID:
303374619
15.

lna_gene_jurkat_cd3d_resampled_dna

Organism:
Homo sapiens
Source name:
Jurkat cell line
Platform:
GPL24676
Series:
GSE119428
Download data: TSV
Sample
Accession:
GSM3374617
ID:
303374617
16.

lna_gene_jurkat_cd3d_resampled_lna

Organism:
Homo sapiens
Source name:
Jurkat cell line
Platform:
GPL24676
Series:
GSE119428
Download data: TSV
Sample
Accession:
GSM3374616
ID:
303374616
17.

lna_cell_pbmc_resampled

Organism:
Homo sapiens
Source name:
Human PBMCs
Platform:
GPL24676
Series:
GSE119428
Download data: TSV
Sample
Accession:
GSM3374614
ID:
303374614
18.

lna_cell_pbmc_original

Organism:
Homo sapiens
Source name:
Human PBMCs
Platform:
GPL24676
Series:
GSE119428
Download data: TSV
Sample
Accession:
GSM3374613
ID:
303374613
19.

lna_cell_mousehuman_resampled

Organism:
Mus musculus; Homo sapiens
Source name:
1:1 mix of NIH3T3 cell line and 293T cell line
Platform:
GPL25526
Series:
GSE119428
Download data: TSV
Sample
Accession:
GSM3374612
ID:
303374612
Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

db=gds|term=GSE119428[Accession]|query=1|qty=3|blobid=MCID_65d96c78a642ff67708a03d9|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
   Taxonomic Groups  [List]
Tree placeholder
    Top Organisms  [Tree]

Find related data

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center