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Items: 8

1.

Widespread transposable element-driven oncogene expression in cancers

(Submitter supplied) Transposable elements act as promiscuous cryptic promoters that upregulate oncogenes (“onco-exaptation”) in many cancers.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platform:
GPL18573
6 Samples
Download data: BEDGRAPH, BIGWIG, COV
Series
Accession:
GSE113946
ID:
200113946

PubMed Full text in PMC Similar studies Analyze with GEO2RSRA Run Selector

2.

Illumina NextSeq 500 (Homo sapiens)

Organism:
Homo sapiens
12374 Series
338274 Samples
Download data
Platform
Accession:
GPL18573
ID:
100018573

3.

nanoCAGE-seq H727

Organism:
Homo sapiens
Source name:
H727 lung cancer cell line
Platform:
GPL18573
Series:
GSE113946
Download data: BEDGRAPH
Sample
Accession:
GSM3462822
ID:
303462822

SRA Run Selector

4.

omniATAC-seq H1299

Organism:
Homo sapiens
Source name:
H1299 lung cancer cell line
Platform:
GPL18573
Series:
GSE113946
Download data: BIGWIG
Sample
Accession:
GSM3124389
ID:
303124389

SRA Run Selector

5.

omniATAC-seq H838

Organism:
Homo sapiens
Source name:
H838 lung cancer cell line
Platform:
GPL18573
Series:
GSE113946
Download data: BIGWIG
Sample
Accession:
GSM3124388
ID:
303124388

SRA Run Selector

6.

CAGE-seq H838

Organism:
Homo sapiens
Source name:
H838 lung cancer cell line
Platform:
GPL18573
Series:
GSE113946
Download data: BEDGRAPH
Sample
Accession:
GSM3124387
ID:
303124387

SRA Run Selector

7.

RNA-seq H838

Organism:
Homo sapiens
Source name:
H838 lung cancer cell line
Platform:
GPL18573
Series:
GSE113946
Download data: BIGWIG
Sample
Accession:
GSM3124386
ID:
303124386

SRA Run Selector

8.

WGBS-seq H838

Organism:
Homo sapiens
Source name:
H838 lung cancer cell line
Platform:
GPL18573
Series:
GSE113946
Download data: COV
Sample
Accession:
GSM3124385
ID:
303124385

SRA Run Selector

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db=gds|term=GSE113946[Accession]|query=1|qty=2|blobid=MCID_66de0dba08e11e1347aff59b|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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