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Items: 8

1.

The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture [ChIP-Seq 2]

(Submitter supplied) Here we show that HNRNPU, the major nuclear matrix attachment factor, is necessary to maintain proper nuclear architecture in mouse hepatocytes. Upon HNRNPU depletion, the interactions between chromatin and nuclear lamina have been changed dramatically;chromatin organization is globally changed; boundaries of topologically associating domains (TADs) become weaker; inter-TAD interactions are increased; thousands of genes are significantly altered coincident with 3D chromatin changes. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL16417
6 Samples
Download data: BED, BW
Series
Accession:
GSE104098
ID:
200104098
2.

Illumina MiSeq (Mus musculus)

Platform
Accession:
GPL16417
ID:
100016417
3.

Input_rep2

Organism:
Mus musculus
Source name:
Input
Platform:
GPL16417
Series:
GSE95116 GSE104098
Download data: BW
Sample
Accession:
GSM2789728
ID:
302789728
4.

Input_rep1

Organism:
Mus musculus
Source name:
Input
Platform:
GPL16417
Series:
GSE95116 GSE104098
Download data: BW
Sample
Accession:
GSM2789727
ID:
302789727
5.

BirA-only_ChIPSeq_rep2

Organism:
Mus musculus
Source name:
BirA-only_ChIPSeq
Platform:
GPL16417
Series:
GSE95116 GSE104098
Download data: BW
Sample
Accession:
GSM2789726
ID:
302789726
6.

BirA-only_ChIPSeq_rep1

Organism:
Mus musculus
Source name:
BirA-only_ChIPSeq
Platform:
GPL16417
Series:
GSE95116 GSE104098
Download data: BW
Sample
Accession:
GSM2789725
ID:
302789725
7.

BirA-HNRNPU_ChIPSeq_rep2

Organism:
Mus musculus
Source name:
BirA-HNRNPU_ChIPSeq
Platform:
GPL16417
Series:
GSE95116 GSE104098
Download data: BW
Sample
Accession:
GSM2789724
ID:
302789724
8.

BirA-HNRNPU_ChIPSeq_rep1

Organism:
Mus musculus
Source name:
BirA-HNRNPU_ChIPSeq
Platform:
GPL16417
Series:
GSE95116 GSE104098
Download data: BW
Sample
Accession:
GSM2789723
ID:
302789723
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Supplemental Content

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