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Items: 1 to 20 of 248

1.

High-Resolution Dissection of Conducive Somatic Cell Reprogramming to Naïve Ground State Pluripotency in Mbd3/NuRD and Gatad2a/NuRD Depleted Systems

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing
4 related Platforms
243 Samples
Download data: BED, TAB, TXT
Series
Accession:
GSE102518
ID:
200102518
2.

Illumina NextSeq 500 (Mus musculus)

Platform
Accession:
GPL19057
ID:
100019057
3.

Illumina HiSeq 1500 (Mus musculus)

Platform
Accession:
GPL18480
ID:
100018480
4.

Illumina HiSeq 2500 (Mus musculus)

Platform
Accession:
GPL17021
ID:
100017021
5.

Illumina HiSeq 2000 (Mus musculus)

Platform
Accession:
GPL13112
ID:
100013112
6.

reprogramming with si-Scramble (control), MEF replicate 2

Organism:
Mus musculus
Source name:
Mbd3f/- OSK2nd cell line, mouse fibroblasts
Platform:
GPL19057
Series:
GSE102348 GSE102518
Download data
Sample
Accession:
GSM3290279
ID:
303290279
7.

reprogramming with si-Scramble (control), MEF replicate 1

Organism:
Mus musculus
Source name:
Mbd3f/- OSK2nd cell line, mouse fibroblasts
Platform:
GPL19057
Series:
GSE102348 GSE102518
Download data
Sample
Accession:
GSM3290278
ID:
303290278
8.

reprogramming with si-Scramble (control), day 7

Organism:
Mus musculus
Source name:
Mbd3f/- OSK2nd cell line, day 7 of reprogramming
Platform:
GPL19057
Series:
GSE102348 GSE102518
Download data
Sample
Accession:
GSM3290277
ID:
303290277
9.

reprogramming with siMyc (for cMyc, nMyc, lMyc), day 7

Organism:
Mus musculus
Source name:
Mbd3f/- OSK2nd cell line, day 7 of reprogramming
Platform:
GPL19057
Series:
GSE102348 GSE102518
Download data
Sample
Accession:
GSM3290276
ID:
303290276
10.

reprogramming with Myc inhibitor, day 3

Organism:
Mus musculus
Source name:
Mbd3f/- OSK2nd cell line, day 3 of reprogramming
Platform:
GPL19057
Series:
GSE102348 GSE102518
Download data
Sample
Accession:
GSM3290275
ID:
303290275
11.

reprogramming with siMyc (for cMyc, nMyc, lMyc), day 3

Organism:
Mus musculus
Source name:
Mbd3f/- OSK2nd cell line, day 3 of reprogramming
Platform:
GPL19057
Series:
GSE102348 GSE102518
Download data
Sample
Accession:
GSM3290274
ID:
303290274
12.

OSK over expression reprogramming, day 4

Organism:
Mus musculus
Source name:
Mbd3f/- cell line, day 4 of reprogramming
Platform:
GPL19057
Series:
GSE102348 GSE102518
Download data
Sample
Accession:
GSM3290273
ID:
303290273
13.

cMyc over expression reprogramming, day 4

Organism:
Mus musculus
Source name:
Mbd3f/- cell line, day 4 of reprogramming
Platform:
GPL19057
Series:
GSE102348 GSE102518
Download data
Sample
Accession:
GSM3290272
ID:
303290272
14.

OSK over expression + cMyc over expression, reprogramming, day 4

Organism:
Mus musculus
Source name:
Mbd3f/- cell line, day 4 of reprogramming
Platform:
GPL19057
Series:
GSE102348 GSE102518
Download data
Sample
Accession:
GSM3290271
ID:
303290271
15.

WGBS from WT system, IPS

Organism:
Mus musculus
Source name:
WT cell line, Established induced pluripotent stem cells
Platform:
GPL19057
Series:
GSE102518 GSE104283
Download data: TAB
Sample
Accession:
GSM2794023
ID:
302794023
16.

WGBS from WT system, Day4

Organism:
Mus musculus
Source name:
WT cell line, Day4 post DOX induction
Platform:
GPL19057
Series:
GSE102518 GSE104283
Download data: TAB
Sample
Accession:
GSM2794022
ID:
302794022
17.

WGBS from WT system, MEF

Organism:
Mus musculus
Source name:
WT Mouse embryonic fibroblasts
Platform:
GPL19057
Series:
GSE102518 GSE104283
Download data: TAB
Sample
Accession:
GSM2794021
ID:
302794021
18.

WGBS from Gatad2a-/- system, IPS

Organism:
Mus musculus
Source name:
Gatad2a-/- cell line, Established induced pluripotent stem cells
Platform:
GPL19057
Series:
GSE102518 GSE104283
Download data: TAB
Sample
Accession:
GSM2794020
ID:
302794020
19.

WGBS from Gatad2a-/- system, Day8

Organism:
Mus musculus
Source name:
Gatad2a-/- cell line, Day8 post DOX induction
Platform:
GPL19057
Series:
GSE102518 GSE104283
Download data: TAB
Sample
Accession:
GSM2794019
ID:
302794019
20.

WGBS from Gatad2a-/- system, Day6

Organism:
Mus musculus
Source name:
Gatad2a-/- cell line, Day6 post DOX induction
Platform:
GPL19057
Series:
GSE102518 GSE104283
Download data: TAB
Sample
Accession:
GSM2794018
ID:
302794018
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