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Items: 9

1.

A somatic role for the histone methyltransferase Setdb1 in endogenous retrovirus silencing [ChIP-Seq]

(Submitter supplied) Subsets of endogenous retroviruses (ERVs) are derepressed in mouse embryonic stem cells (mESCs) deficient for Setdb1, which catalyzes histone H3 lysine 9 trimethylation (H3K9me3). Most of those ERVs, including IAPs, remain silent if Setdb1 is deleted in differentiated embryonic cells; however they are derepressed when deficient for Dnmt1, suggesting that Setdb1 is dispensable for ERV silencing in somatic cells. more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL18480
7 Samples
Download data: BED, BW
Series
Accession:
GSE102487
ID:
200102487
2.

Illumina HiSeq 1500 (Mus musculus)

Platform
Accession:
GPL18480
ID:
100018480
3.

input_ChIPseq_Setdb1 cKO iMEFs_KO

Organism:
Mus musculus
Source name:
iMEF
Platform:
GPL18480
Series:
GSE102487 GSE102490
Download data
Sample
Accession:
GSM2750495
ID:
302750495
4.

input_ChIPseq_Setdb1 cKO iMEFs_WT

Organism:
Mus musculus
Source name:
iMEF
Platform:
GPL18480
Series:
GSE102487 GSE102490
Download data
Sample
Accession:
GSM2750494
ID:
302750494
5.

H3K9me3_ChIPseq_Setdb1 cKO iMEFs_KO

Organism:
Mus musculus
Source name:
iMEF
Platform:
GPL18480
Series:
GSE102487 GSE102490
Download data: BW
Sample
Accession:
GSM2750492
ID:
302750492
6.

H3K9me3_ChIPseq_Setdb1 cKO iMEFs_WT

Organism:
Mus musculus
Source name:
iMEF
Platform:
GPL18480
Series:
GSE102487 GSE102490
Download data: BW
Sample
Accession:
GSM2750487
ID:
302750487
7.

input_ChIPseq_forebrain E14.5_WT

Organism:
Mus musculus
Source name:
fetal forebrain E14.5
Platform:
GPL18480
Series:
GSE102487 GSE102490
Download data
Sample
Accession:
GSM2739380
ID:
302739380
8.

H3K9me3_ChIPseq_forebrain E14.5_WT2

Organism:
Mus musculus
Source name:
fetal forebrain E14.5
Platform:
GPL18480
Series:
GSE102487 GSE102490
Download data: BW
Sample
Accession:
GSM2739379
ID:
302739379
9.

H3K9me3_ChIPseq_forebrain E14.5_WT1

Organism:
Mus musculus
Source name:
fetal forebrain E14.5
Platform:
GPL18480
Series:
GSE102487 GSE102490
Download data: BW
Sample
Accession:
GSM2739378
ID:
302739378
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Supplemental Content

db=gds|term=GSE102487[Accession]|query=1|qty=2|blobid=MCID_6648c31b3844a3792a3aecbe|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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