GPL9784[Accession] - GEO DataSets

Warning: The NCBI web site requires JavaScript to function. more...

Format

Summary
Summary (text)
Unique Identifier List

Sort by

Default order
Number of Samples (High to Low)
Number of Samples (Low to High)

Send to:

Choose Destination

File
Clipboard
Collections

Search results

Items: 3

Select item 2000194131.

ChIP-chip Designs to Interrogate the Xenopus Embryo Genome for Transcription Factor Binding and Epigenetic Regulation

(Submitter supplied) Background: Chromatin immunoprecipitation combined with genome tile path microarrays or deep sequencing can be used to study genome-wide epigenetic profiles and the transcription factor binding repertoire. Although well studied in a variety of cell lines, these genome-wide profiles have so far been little explored in vertebrate embryos. Principal findings: Here we report on two genome tile path ChIP-chip designs for interrogating the Xenopus tropicalis genome. more...

Organism:: Xenopus tropicalis

Type:: Genome binding/occupancy profiling by genome tiling array

8 related Platforms
10 Samples

Download data: BED, BEDGRAPH, PAIR, TXT, ZIP

Series

Accession:: GSE19413

ID:: 200019413

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000097842.

NimbleGen Xenopus tropicalis Whole Genome Tiling v1.0 slide 5c

(Submitter supplied) JGI 4.1 (UCSC xenTro2) Protocol: According to manufacturer's protocol (Roche Nimblegen)

Organism:: Xenopus tropicalis

1 Series
1 Sample

Download data: NDF, POS

Platform

Accession:: GPL9784

ID:: 100009784

Select item 3004827813.

H3K4me3 replicate1g

Organism:: Xenopus tropicalis

Source name:: H3K4me3 ChIP DNA from Xenopus tropicalis embryos, Nieuwkoop-Faber stage 11-12 (channel 1) Input DNA from Xenopus tropicalis embryos, Nieuwkoop-Faber stage 11-12 (channel 2)