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Items: 4

1.

DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions

(Submitter supplied) Eukaryotic chromosomes replicate in a temporal order known as the replication-timing program. In mammals, replication timing is cell type-specific with at least half the genome switching replication timing during development, primarily in units of 400-800 kilobases ('replication domains;), whose positions are preserved in different cell types, conserved between species, and appear to confine long-range effects of chromosome rearrangements. more...
Organism:
Homo sapiens; Mus musculus
Type:
Other
25 related Platforms
993 Samples
Download data: BAM, BED, BIGWIG, BROADPEAK, NARROWPEAK, PAIR, TSV, TXT
Series
Accession:
GSE51334
ID:
200051334
2.

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

(Submitter supplied) Proper genome functionality is underpinned by the non-random, spatial or ganisation of chromatin. At the periphery of the nucleus, the association of chr omatin with the nuclear lamina is thought to facilitate both structural organisa tion and regulation of gene expression. Except for a small number of individual loci, the regions of the human genome that locate at the nuclear lamina have not been identified. more...
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by genome tiling array
9 related Platforms
10 Samples
Download data: TSV, TXT
Series
Accession:
GSE8854
ID:
200008854
3.

NKI/VanSteensel_HSA_390k_7/8_v070724

(Submitter supplied) Non-repetitive part of Human chromosomes HSA10, HSA11, HSA15. Probe spacing approximately 750bp. Based on Human genome sequence NCBI 36. Platform 7 of 8, covering the whole human genome. Includes 9731 probes common to all 8 arrays of this series, used for between array normalization. Protocol: Details on the manufacture protocol can be found on http://www.nimblegen.com/technology/index.html
Organism:
Homo sapiens
2 Series
1 Sample
Download data
Platform
Accession:
GPL5668
ID:
100005668
4.

Tig3 human fibroblast cells, LaminB1 DamID, platform 7/8

Organism:
Homo sapiens
Source name:
Tig3 Human fibroblast cells, expressing LaminB1-Dam (channel 1) Tig3 Human fibroblast cells, expressing Dam (channel 2)
Platform:
GPL5668
Series:
GSE8854 GSE51334
Download data: TSV
Sample
Accession:
GSM220164
ID:
300220164
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