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Items: 20

1.

Conserved white-rot enzymatic mechanism for wood decay in the Basidiomycota genus Pycnoporus

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Trametes coccinea; Trametes cinnabarina; Trametes sanguinea
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL21052 GPL21988 GPL21989
50 Samples
Download data
Series
Accession:
GSE82486
ID:
200082486

PubMed Full text in PMC Similar studies

2.

Early response of three Pycnoporus species to various carbon sources [Pycnoporus cinnabarinus]

(Submitter supplied) White-rot basidiomycete fungi are potent degraders of plant biomass with the ability to mineralize all lignocellulose components. Recent comparative genomics studies showed that these fungi use a wide diversity of enzymes for wood degradation. Deeper functional analyses are however necessary to understand the enzymatic mechanisms leading to lignocellulose breakdown. In the present study we analyzed the early response of the Polyporales fungi Pycnoporus coccineus CIRM-BRFM310, Pycnoporus cinnabarinus CIRM-BRFM137 and Pycnoporus sanguineus CIRM-BRFM 1264 to various carbon sources including lignocellulosic biomass.
Organism:
Trametes cinnabarina
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21988
17 Samples
Download data: TXT
Series
Accession:
GSE82427
ID:
200082427

PubMed Full text in PMC Similar studies SRA Run Selector

3.

Illumina HiSeq 2500 (Trametes cinnabarina)

Organism:
Trametes cinnabarina
2 Series
17 Samples
Download data
Platform
Accession:
GPL21988
ID:
100021988

4.

Pycnoporus cinnabarinus, wheat straw rep3

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191138
ID:
302191138

SRA Run Selector

5.

Pycnoporus cinnabarinus, wheat straw rep2

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191137
ID:
302191137

SRA Run Selector

6.

Pycnoporus cinnabarinus, wheat straw rep1

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191135
ID:
302191135

SRA Run Selector

7.

Pycnoporus cinnabarinus, xylan-galactomannan rep3

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191133
ID:
302191133

SRA Run Selector

8.

Pycnoporus cinnabarinus, xylan-galactomannan rep2

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191132
ID:
302191132

SRA Run Selector

9.

Pycnoporus cinnabarinus, xylan-galactomannan rep1

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191131
ID:
302191131

SRA Run Selector

10.

Pycnoporus cinnabarinus, Avicel rep3

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191130
ID:
302191130

SRA Run Selector

11.

Pycnoporus cinnabarinus, Avicel rep1

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191128
ID:
302191128

SRA Run Selector

12.

Pycnoporus cinnabarinus, aspen rep3

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191126
ID:
302191126

SRA Run Selector

13.

Pycnoporus cinnabarinus, aspen rep2

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191125
ID:
302191125

SRA Run Selector

14.

Pycnoporus cinnabarinus, aspen rep1

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191124
ID:
302191124

SRA Run Selector

15.

Pycnoporus cinnabarinus, pine rep3

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191123
ID:
302191123

SRA Run Selector

16.

Pycnoporus cinnabarinus, pine rep2

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191121
ID:
302191121

SRA Run Selector

17.

Pycnoporus cinnabarinus, pine rep1

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191119
ID:
302191119

SRA Run Selector

18.

Pycnoporus cinnabarinus, maltose rep3

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191118
ID:
302191118

SRA Run Selector

19.

Pycnoporus cinnabarinus, maltose rep2

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191117
ID:
302191117

SRA Run Selector

20.

Pycnoporus cinnabarinus, maltose rep1

Organism:
Trametes cinnabarina
Source name:
mycelium
Platform:
GPL21988
Series:
GSE82427 GSE82486
Download data
Sample
Accession:
GSM2191115
ID:
302191115

SRA Run Selector

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