GPL14835[Accession] - GEO DataSets - NCBI

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Select item 2000359971.

DNA hypermethylation in placental tissues: placental tissues vs. maternal peripheral bloods

(Submitter supplied) Noninvasive prenatal diagnosis currently used does not achieve desirable levels of sensitivity and specificity. Recently, fetal methylated DNA biomarkers in maternal whole blood have been explored for noninvasive prenatal detection. However, such efforts cover only chromosomal aneuploidy; fetal methylated DNA biomarkers for detecting single-gene disease remain to be discovered. To address this issue, we systematically screened significantly hypermethylated genes in fetal tissues compared with maternal blood for noninvasive prenatal diagnosis of various inherited diseases. more...

Organism:: Homo sapiens

Type:: Methylation profiling by array

Platform:: GPL14835
8 Samples

Download data: TXT

Series

Accession:: GSE35997

ID:: 200035997

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000335452.

DNA hypermethylation in colorectal cancer: Colorectal cancer tissues vs. Adjacent non-tumor tissues

(Submitter supplied) To identify novel hypermethylated genes in colorectal cancer (CRC) and to test their potential application in CRC early diagnosis, we performed a genome-wide screening of 57,723 CpG dinucleotides covering 4,010 genes in paired DNA samples extracted from 3 fresh frozen CRC tissues and their matching non-tumor adjacent tissues from a cohort of 3 CRC patients undergoing curative surgery using MIRA-based microarray. more...

Organism:: Homo sapiens

Type:: Methylation profiling by array

Platform:: GPL14835
6 Samples

Download data: TXT

Series

Accession:: GSE33545

ID:: 200033545

PubMed Similar studies Analyze with GEO2R

Select item 2000334503.

DNA hypermethylation and gene expression in breast cancer: breast cancer tissues vs. normal breast tissues

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Methylation profiling by array; Expression profiling by array

Platforms:: GPL14835 GPL14550
36 Samples

Download data: TXT

Series

Accession:: GSE33450

ID:: 200033450

PubMed Similar studies Analyze with GEO2R

Select item 2000334454.

DNA hypermethylation in breast cancer: breast cancer tissues vs. normal breast tissues

(Submitter supplied) To screen candidate methylation markers for early detection of breast cancer, we performed methylated-CpG island recovery assay combined with CpG island array on 61982 CpG sites across 4162 genes in 10 breast tumor tissues and 10 non-tumor breast tissues. We detected 70 significantly hypermethylated genes in breast tumor tissues, including many novel hypermethylated genes such as ITGA4, NFIX, OTX2 and FGF12. more...

Organism:: Homo sapiens

Type:: Methylation profiling by array

Platform:: GPL14835
20 Samples

Download data: TXT

Series

Accession:: GSE33445

ID:: 200033445

PubMed Similar studies Analyze with GEO2R

Select item 1000148355.

Agilent-029842 60K_CpG2

(Submitter supplied) The same as the manufacture protocol of Agilent Human CpG Island Microaray Kit, 1x244K (Catalog:G4492A).See manufacturer's web site at http://www.agilent.com/

Organism:: Homo sapiens

4 Series
34 Samples

Platform

Accession:: GPL14835

ID:: 100014835

Select item 3008790696.

maternal whole blood replicate 4

Organism:: Homo sapiens

Source name:: methylated CpG-island recovery assay (MIRA) enriched, maternal whole blood, 4 of 4 mother-baby pairs (channel 1) input, maternal whole blood, 4 of 4 mother-baby pairs (channel 2)

Platform:: GPL14835
Series:: GSE35997

Download data: TXT

Sample

Accession:: GSM879069

ID:: 300879069

Select item 3008790687.

maternal whole blood replicate 3

Organism:: Homo sapiens

Source name:: methylated CpG-island recovery assay (MIRA) enriched, maternal whole blood, 3 of 4 mother-baby pairs (channel 1) input, maternal whole blood, 3 of 4 mother-baby pairs (channel 2)

Platform:: GPL14835
Series:: GSE35997

Download data: TXT

Sample

Accession:: GSM879068

ID:: 300879068

Select item 3008790678.

maternal whole blood replicate 2

Organism:: Homo sapiens

Source name:: methylated CpG-island recovery assay (MIRA) enriched, maternal whole blood, 2 of 4 mother-baby pairs (channel 1) input, maternal whole blood, 2 of 4 mother-baby pairs (channel 2)

Platform:: GPL14835
Series:: GSE35997

Download data: TXT

Sample

Accession:: GSM879067

ID:: 300879067

Select item 3008790669.

maternal whole blood replicate 1

Organism:: Homo sapiens

Source name:: methylated CpG-island recovery assay (MIRA) enriched, maternal whole blood, 1 of 4 mother-baby pairs (channel 1) input, maternal whole blood, 1 of 4 mother-baby pairs (channel 2)

Platform:: GPL14835
Series:: GSE35997

Download data: TXT

Sample

Accession:: GSM879066

ID:: 300879066

Select item 30087906510.

placental tissue replicate 4

Organism:: Homo sapiens

Source name:: methylated CpG-island recovery assay (MIRA) enriched, placental tissue, 4 of 4 mother-baby pairs (channel 1) input, placental tissue, 4 of 4 mother-baby pairs (channel 2)

Platform:: GPL14835
Series:: GSE35997

Download data: TXT

Sample

Accession:: GSM879065

ID:: 300879065

Select item 30087906411.

placental tissue replicate 3

Organism:: Homo sapiens

Source name:: methylated CpG-island recovery assay (MIRA) enriched,placental tissue, 3 of 4 mother-baby pairs (channel 1) input, placental tissue, 3 of 4 mother-baby pairs (channel 2)

Platform:: GPL14835
Series:: GSE35997

Download data: TXT

Sample

Accession:: GSM879064

ID:: 300879064

Select item 30087906312.

placental tissue replicate 2

Organism:: Homo sapiens

Source name:: methylated CpG-island recovery assay (MIRA) enriched,placental tissue, 2 of 4 mother-baby pairs (channel 1) input, placental tissue, 2 of 4 mother-baby pairs (channel 2)

Platform:: GPL14835
Series:: GSE35997

Download data: TXT

Sample

Accession:: GSM879063

ID:: 300879063

Select item 30087906213.

placental tissue replicate 1

Organism:: Homo sapiens

Source name:: methylated CpG-island recovery assay (MIRA) enriched,placental tissue, 1 of 4 mother-baby pairs (channel 1) input, placental tissue, 1 of 4 mother-baby pairs (channel 2)

Platform:: GPL14835
Series:: GSE35997

Download data: TXT

Sample

Accession:: GSM879062

ID:: 300879062

Select item 30082965314.

Paired adjacent non-cancer tissue Replicate 3

Organism:: Homo sapiens

Source name:: methylated CpG-island recovery assay (MIRA) enriched,adjacent non-cancer tissue,colorectal cancer patient 3 (channel 1) Input, adjacent non-cancer tissue,colorectal cancer patient 3 (channel 2)

Platform:: GPL14835
Series:: GSE33545

Download data: TXT

Sample

Accession:: GSM829653

ID:: 300829653

Select item 30082965215.

Colorectal cancer tissue Replicate 3

Organism:: Homo sapiens

Source name:: methylated CpG-island recovery assay (MIRA) enriched,cancer tissue,colorectal cancer patient 3 (channel 1) nput，cancer tissue,colorectal cancer patient 3 (channel 2)

Platform:: GPL14835
Series:: GSE33545

Download data: TXT

Sample

Accession:: GSM829652

ID:: 300829652

Select item 30082965116.

Paired adjacent non-cancer tissue Replicate 2

Organism:: Homo sapiens

Source name:: methylated CpG-island recovery assay (MIRA) enriched,adjacent non-cancer tissue,colorectal cancer patient 2 (channel 1) Input, adjacent non-cancer tissue,colorectal cancer patient 2 (channel 2)

Platform:: GPL14835
Series:: GSE33545

Download data: TXT

Sample

Accession:: GSM829651

ID:: 300829651

Select item 30082965017.

Colorectal cancer tissue Replicate 2

Organism:: Homo sapiens

Source name:: methylated CpG-island recovery assay (MIRA) enriched,cancer tissue,colorectal cancer patient 2 (channel 1) Input, cancer tissue,colorectal cancer patient 2 (channel 2)

Platform:: GPL14835
Series:: GSE33545

Download data: TXT

Sample

Accession:: GSM829650

ID:: 300829650

Select item 30082964918.

Paired adjacent non-cancer tissue Replicate 1

Organism:: Homo sapiens

Source name:: methylated CpG-island recovery assay (MIRA) enriched,adjacent non-cancer tissue,colorectal cancer patient 1 (channel 1) Input, adjacent non-cancer tissue,colorectal cancer patient 1 (channel 2)

Platform:: GPL14835
Series:: GSE33545

Download data: TXT

Sample

Accession:: GSM829649

ID:: 300829649

Select item 30082964819.

Colorectal cancer tissue Replicate 1

Organism:: Homo sapiens

Source name:: methylated CpG-island recovery assay (MIRA) enriched,cancer tissue,colorectal cancer patient 1 (channel 1) Input, cancer tissue,colorectal cancer patient 1 (channel 2)

Platform:: GPL14835
Series:: GSE33545

Download data: TXT

Sample

Accession:: GSM829648

ID:: 300829648

Select item 30082705320.

Normal breast tissue Replicate 10

Organism:: Homo sapiens

Source name:: methylated CpG-island recovery assay (MIRA) enriched, normal breast tissue,non-breast cancer patient 10 (channel 1) input, normal breast tissue,non-breast cancer patient 10 (channel 2)

Platform:: GPL14835
Series:: GSE33445 GSE33450

Download data: TXT

Sample

Accession:: GSM827053

ID:: 300827053

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