nsv522850
- Organism: Homo sapiens
- Study:nstd21 (Shaikh et al. 2009)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:8,268
- Publication(s):Shaikh et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 109 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 109 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 6 SVs from 5 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv522850 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000014.9 | Chr14 | 21,521,707 | 21,529,974 |
| nsv522850 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000014.8 | Chr14 | 21,989,841 | 21,998,108 |
| nsv522850 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000014.7 | Chr14 | 21,059,681 | 21,067,948 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv698503 | copy number gain | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv698503 | Remapped | Perfect | NC_000014.9:g.(?_2 1521707)_(21529974 _?)dup | GRCh38.p12 | First Pass | NC_000014.9 | Chr14 | 21,521,707 | 21,529,974 |
| nssv698503 | Remapped | Perfect | NC_000014.8:g.(?_2 1989841)_(21998108 _?)dup | GRCh37.p13 | First Pass | NC_000014.8 | Chr14 | 21,989,841 | 21,998,108 |
| nssv698503 | Submitted genomic | NC_000014.7:g.(?_2 1059681)_(21067948 _?)dup | NCBI35 (hg17) | NC_000014.7 | Chr14 | 21,059,681 | 21,067,948 |