nsv3903056
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:9,859
- Description:GRCh37/hg19 22q13.1(chr22:38212254-38222112)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 99 SVs from 34 studies. See in: genome view
Overlapping variant regions from other studies: 99 SVs from 34 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3903056 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 37,816,247 | 37,826,105 |
nsv3903056 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000022.10 | Chr22 | 38,212,254 | 38,222,112 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15162113 | copy number gain | Multiple | Multiple | not provided | Benign | ClinVar | RCV000741961.2, VCV000605325.2 | 3 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv15162113 | Remapped | Perfect | NC_000022.11:g.(?_ 37816247)_(3782610 5_?)dup | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 37,816,247 | 37,826,105 |
nssv15162113 | Submitted genomic | NC_000022.10:g.(?_ 38212254)_(3822211 2_?)dup | GRCh37 (hg19) | NC_000022.10 | Chr22 | 38,212,254 | 38,222,112 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15162113 | GRCh37: NC_000022.10:g.(?_38212254)_(38222112_?)dup | copy number gain | unknown | not provided | Benign | ClinVar | RCV000741961.2, VCV000605325.2 | 3 |